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L1_008_000M1_scaffold_2934

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2934_1
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..166)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KJ84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31544.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_008_000M1_scaffold_2934_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(232..513)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B390_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50015.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Protein of unknown function (DUF1292).
L1_008_000M1_scaffold_2934_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(527..1462)
DNA (936bp) protein (312aa)
Fructose-1 6-bisphosphate aldolase class II n=1 Tax=Clostridium sp. CAG:226 RepID=R5B739_9CLOT
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CCX50014.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
fructose-1,6-bisphosphate aldolase
L1_008_000M1_scaffold_2934_4
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1664..2596
DNA (933bp) protein (311aa)
Uncharacterized glycosyltransferase ykcC n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AQ63_9CLOT
Uncharacterized glycosyltransferase ykcC {ECO:0000313|EMBL:CCX42897.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
glycosyltransferase
L1_008_000M1_scaffold_2934_5
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2604..3719
DNA (1116bp) protein (372aa)
Peptidase M29 aminopeptidase II n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ADB7_9CLOT
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:CCX41210.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
Aminopeptidase
L1_008_000M1_scaffold_2934_6
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3959..4972
DNA (1014bp) protein (338aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase type I n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFP8_9CLOT
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_2934_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5227..6243
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B872_9CLOT
L1_008_000M1_scaffold_2934_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6486..7442
DNA (957bp) protein (319aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EDS11759.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EDS11759.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA81_9FIRM
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
L1_008_000M1_scaffold_2934_9
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7505..8806)
DNA (1302bp) protein (434aa)
Arsenical pump membrane protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6BU78_9CLOT
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
anion permease
L1_008_000M1_scaffold_2934_10
unknown

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9036..9296
DNA (261bp) protein (87aa)

This feature has no annotations

L1_008_000M1_scaffold_2934_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9621..12032
DNA (2412bp) protein (804aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
leucyl-tRNA synthetase, eubacterial and mitochondrial family (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B139_9CLOT
Displaying 11 items

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