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L1_008_000M1_scaffold_7041

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_7041_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..205)
-----------------
DNA (204bp)
protein (68aa)
LmbE family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B668_9CLOT
LmbE family protein {ECO:0000313|EMBL:CCX51040.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_7041_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(234..953)
-----------------
DNA (720bp)
protein (240aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
nagB; glucosamine-6-phosphate deaminase NagB (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9W6_9CLOT
L1_008_000M1_scaffold_7041_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(958..1395)
-----------------
DNA (438bp)
protein (146aa)
Transcriptional regulator/sugar kinase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B710_9CLOT
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:CCX51038.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
transcriptional repressor
L1_008_000M1_scaffold_7041_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1506..2132)
-----------------
DNA (627bp)
protein (209aa)
Transcriptional regulator/sugar kinase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B710_9CLOT
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:CCX51038.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ROK family protein
L1_008_000M1_scaffold_7041_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2154..3110)
-----------------
DNA (957bp)
protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX51037.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L1_008_000M1_scaffold_7041_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3103..4164)
-----------------
DNA (1062bp)
protein (354aa)
Oligopeptide transport ATP-binding protein OppD n=1 Tax=Clostridium sp. CAG:226 RepID=R5BHZ6_9CLOT
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CCX51036.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
oppD; oligopeptide ABC transporter (ATP-binding protein)
L1_008_000M1_scaffold_7041_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4177..5268)
-----------------
DNA (1092bp)
protein (364aa)
Oligopeptide ABC transporter permease protein AmiD n=1 Tax=Clostridium sp. CAG:226 RepID=R5B663_9CLOT
Oligopeptide ABC transporter permease protein AmiD {ECO:0000313|EMBL:CCX51035.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_000M1_scaffold_7041_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5268..6212)
-----------------
DNA (945bp)
protein (315aa)
ABC-type transporter integral membrane subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9W2_9CLOT
ABC-type transporter integral membrane subunit {ECO:0000313|EMBL:CCX51034.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC transporter permease
L1_008_000M1_scaffold_7041_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6381..6836)
-----------------
DNA (456bp)
protein (152aa)
ABC transporter substrate-binding protein-oligopeptide transport n=1 Tax=Clostridium sp. CAG:226 RepID=R5B707_9CLOT
ABC transporter substrate-binding protein-oligopeptide transport {ECO:0000313|EMBL:CCX51033.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
aliB; oligopeptide-binding protein aliB
Displaying 9 items

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