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L1_008_000M1_scaffold_6135

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_6135_1
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(3..671)
DNA (669bp) protein (223aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
prolyl-tRNA synthetase, family II (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V8E0_9FIRM
L1_008_000M1_scaffold_6135_2
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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882..1778
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LCD6_RUMC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL17281.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L1_008_000M1_scaffold_6135_3
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

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1874..2995
DNA (1122bp) protein (374aa)
amidohydrolase (EC:3.5.1.14)
Amidohydrolase {ECO:0000313|EMBL:ADE57732.1}; EC=3.5.1.14 {ECO:0000313|EMBL:ADE57732.1};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Amidohydrolase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGQ0_AMICL
L1_008_000M1_scaffold_6135_4
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3063..3392)
DNA (330bp) protein (110aa)
Thioredoxin n=1 Tax=Clostridium sp. BNL1100 RepID=H2JGP6_9CLOT
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L1_008_000M1_scaffold_6135_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3382..3828)
DNA (447bp) protein (149aa)
Positive regulator of sigma E RseC/MucC n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3F3_9CLOT
Positive regulator of sigma E RseC/MucC {ECO:0000313|EMBL:CCX50090.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
sigma E positive regulator RseC/MucC
L1_008_000M1_scaffold_6135_6
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3911..4624)
DNA (714bp) protein (238aa)
SNARE-like domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A622_9CLOT
SNARE-like domain protein {ECO:0000313|EMBL:CCX38348.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_008_000M1_scaffold_6135_7
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4796..6589)
DNA (1794bp) protein (598aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AHX8_9CLOT
Aspartate--tRNA ligase {ECO:0000313|EMBL:CCX42453.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
L1_008_000M1_scaffold_6135_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6605..7870)
DNA (1266bp) protein (422aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BB71_9CLOT
Displaying 8 items

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