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L1_008_000M1_scaffold_4118

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_4118_1
unknown

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comp(2..88)
DNA (87bp) protein (29aa)

This feature has no annotations

L1_008_000M1_scaffold_4118_2
unknown

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comp(172..918)
DNA (747bp) protein (249aa)

This feature has no annotations

L1_008_000M1_scaffold_4118_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(905..1951)
DNA (1047bp) protein (349aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2E4_9CLOT
L1_008_000M1_scaffold_4118_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1948..2511)
DNA (564bp) protein (188aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Lipoprotein signal peptidase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BE98_9CLOT
lipoprotein signal peptidase
L1_008_000M1_scaffold_4118_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2595..4226)
DNA (1632bp) protein (544aa)
ABC-type dipeptide transport system periplasmic component n=1 Tax=Clostridium sp. CAG:226 RepID=R5BA62_9CLOT
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:CCX49752.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC transporter substrate-binding protein
L1_008_000M1_scaffold_4118_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4204..4869)
DNA (666bp) protein (222aa)
Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains) n=1 Tax=Clostridium sp. CAG:226 RepID=R5B389_9CLOT
Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains) {ECO:0000313|EMBL:CCX49753.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
lytic transglycosylase
L1_008_000M1_scaffold_4118_7
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4866..5477)
DNA (612bp) protein (204aa)
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
Dephospho-CoA kinase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WSR8_KYRT2
L1_008_000M1_scaffold_4118_8
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5491..8055)
DNA (2565bp) protein (855aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Clostridium sp. CAG:138 RepID=R6AWK3_9CLOT
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_4118_9
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8139..8855)
DNA (717bp) protein (239aa)
pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ASD2_9CLOT
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:CCX42066.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
Displaying 9 items

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