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L1_008_000M1_scaffold_463

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_463_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1530
DNA (1530bp) protein (510aa)
Oligopeptide-binding protein aliB n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDV9_9CLOT
Oligopeptide-binding protein aliB {ECO:0000313|EMBL:CCX49606.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type oligopeptide transport system, periplasmic component
L1_008_000M1_scaffold_463_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1647..2585
DNA (939bp) protein (313aa)
ABC-type transporter integral membrane subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5B227_9CLOT
ABC-type transporter integral membrane subunit {ECO:0000313|EMBL:CCX49605.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC transporter permease
L1_008_000M1_scaffold_463_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2587..3528
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5Z3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49604.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type transporter, integral membrane subunit
L1_008_000M1_scaffold_463_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3543..5561
DNA (2019bp) protein (673aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2W1_9CLOT
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX49603.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_463_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5561..6004
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9R1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49602.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_463_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6012..6728
DNA (717bp) protein (239aa)
Amidohydrolase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDV6_9CLOT
Amidohydrolase {ECO:0000313|EMBL:CCX49601.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
amidohydrolase
L1_008_000M1_scaffold_463_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6810..7148
DNA (339bp) protein (113aa)
Amidohydrolase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDV6_9CLOT
Amidohydrolase {ECO:0000313|EMBL:CCX49601.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Imidazolonepropionase and related amidohydrolases
L1_008_000M1_scaffold_463_8
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7326..7760
DNA (435bp) protein (145aa)
Appr-1-p processing domain protein (Fragment) n=1 Tax=Acetonema longum DSM 6540 RepID=F7NF29_9FIRM
Appr-1-p processing domain protein {ECO:0000313|EMBL:EGO65356.1}; Flags: Fragment;; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
L1_008_000M1_scaffold_463_9
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7757..8365
DNA (609bp) protein (203aa)
Appr-1-p processing protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2BD6E
Appr-1-p processing protein {ECO:0000313|EMBL:KGP76145.1}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
Appr-1-p processing protein
L1_008_000M1_scaffold_463_10
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8446..9099
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2BD6D
von Willebrand factor type A {ECO:0000313|EMBL:KGP76147.1}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
hypothetical protein
L1_008_000M1_scaffold_463_11
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9151..9939)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9KC42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS41027.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L1_008_000M1_scaffold_463_12
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9920..10816)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K456_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS41026.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L1_008_000M1_scaffold_463_13
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

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comp(10816..11433)
DNA (618bp) protein (206aa)
TetR family transcriptional regulator id=1711347 bin=GWB2_Clostridiales_37_7 species=Eubacterium limosum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
TetR family transcriptional regulator
Tax=GWB2_Clostridiales_37_7_curated
L1_008_000M1_scaffold_463_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11643..12371
DNA (729bp) protein (243aa)
UbiC transcription regulator-associated domain protein n=2 Tax=Oscillibacter RepID=U2QRR3_9FIRM
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:ERK62121.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative GntR family transcriptional regulator
L1_008_000M1_scaffold_463_15
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12418..12915
DNA (498bp) protein (166aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NA47_9CLOT
L1_008_000M1_scaffold_463_16
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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12955..13683
DNA (729bp) protein (243aa)
purC; Phosphoribosylaminoimidazole-succinocarboxamidesynthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase id=4170184 bin=GWF2_Clostridiales_38_85 species=Anaerotruncus colihominis genus=Anaerotruncus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
L1_008_000M1_scaffold_463_17
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13664..15127
DNA (1464bp) protein (488aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UC05_9FIRM
L1_008_000M1_scaffold_463_18
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15120..16160
DNA (1041bp) protein (347aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
purM; Phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=2 Tax=Firmicutes RepID=R6Q4B1_9FIRM
L1_008_000M1_scaffold_463_19
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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16154..16765
DNA (612bp) protein (204aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M7M9_9FIRM
L1_008_000M1_scaffold_463_20
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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16767..17483
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PXX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC25614.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
IMP cyclohydrolase-like protein.
L1_008_000M1_scaffold_463_21
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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17494..18675
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 PF2_9FIRM">RepID=R5APF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX41056.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
putative IMP cyclohydrolase
L1_008_000M1_scaffold_463_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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18692..19972
DNA (1281bp) protein (427aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=2 Tax=Oscillibacter RepID=U2QGV4_9FIRM
L1_008_000M1_scaffold_463_23
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19981..23679
DNA (3699bp) protein (1233aa)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MR94_9FIRM
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CCY92234.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
carbamoyl-phosphate synthase, large subunit
L1_008_000M1_scaffold_463_24
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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23705..24541
DNA (837bp) protein (279aa)
Methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5)
Bifunctional protein FolD n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U8U9_ETHHY
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L1_008_000M1_scaffold_463_25
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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24561..26069
DNA (1509bp) protein (503aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TF00_9FIRM
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:CDC68279.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L1_008_000M1_scaffold_463_26
unknown

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comp(26321..26677)
DNA (357bp) protein (119aa)

This feature has no annotations

L1_008_000M1_scaffold_463_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26682..26888)
DNA (207bp) protein (69aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPW6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEQ59508.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
XRE family transcriptional regulator
L1_008_000M1_scaffold_463_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(26893..27204)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUQ6_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ19514.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_000M1_scaffold_463_29
unknown

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27255..27800
DNA (546bp) protein (182aa)

This feature has no annotations

L1_008_000M1_scaffold_463_30
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27935..28429
DNA (495bp) protein (165aa)
Sigma-70 region 2 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3F8_9CLOT
Sigma-70 region 2 {ECO:0000313|EMBL:CCX49823.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
RNA polymerase sigma subunit
Displaying items 1-30 of 55 in total

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