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L1_008_000M1_scaffold_5057

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_5057_1
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(2..472)
-----------------
DNA (471bp)
protein (157aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HRD3_9FIRM
L1_008_000M1_scaffold_5057_2
Streptomyces sp. PVA 94-07, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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703..843
-----------------
DNA (141bp)
protein (47aa)
Dehydrogenase n=2 Tax=Streptomyces RepID=V4IPD0_9ACTO
Dehydrogenase {ECO:0000313|EMBL:ESQ03864.1}; TaxID=1223307 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PVA 94-07.;"
Dehydrogenase
L1_008_000M1_scaffold_5057_3
unknown

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comp(941..1345)
-----------------
DNA (405bp)
protein (135aa)

This feature has no annotations

L1_008_000M1_scaffold_5057_4
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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1788..2606
-----------------
DNA (819bp)
protein (273aa)
short-chain dehydrogenase/reductase SDR id=14430699 bin=bin3_NC10 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
oxidoreductase
Tax=RBG_16_Actinobacteria_64_13_curated
L1_008_000M1_scaffold_5057_5
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3614..4147
-----------------
DNA (534bp)
protein (178aa)
ABC transporter permease subunit n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VSW6_CLOSH
ABC transporter permease subunit
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AGC69679.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L1_008_000M1_scaffold_5057_6
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4119..6659
-----------------
DNA (2541bp)
protein (847aa)
ABC transporter permease subunit n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VSW6_CLOSH
ABC transporter permease subunit
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AGC69679.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L1_008_000M1_scaffold_5057_7

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6656..7381
-----------------
DNA (726bp)
protein (242aa)
ABC transporter ATPase subunit n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VVX2_CLOSH
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF24878.1}; TaxID=1393535 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig21.;"
ABC transporter ATPase subunit
L1_008_000M1_scaffold_5057_8
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7673..8584
-----------------
DNA (912bp)
protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AR69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX41666.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
L1_008_000M1_scaffold_5057_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8669..10069)
-----------------
DNA (1401bp)
protein (467aa)
NlpC/P60 family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCW8_9CLOT
NlpC/P60 family protein {ECO:0000313|EMBL:CCX49271.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
peptidoglycan binding domain-containing protein
L1_008_000M1_scaffold_5057_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10216..11232
-----------------
DNA (1017bp)
protein (339aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8S8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49272.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_5057_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11282..11431
-----------------
DNA (150bp)
protein (50aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4Y7_9CLOT
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CCX49274.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC transporter
Displaying 11 items

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