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L1_008_000M1_scaffold_5425

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_5425_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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75..935
DNA (861bp) protein (287aa)
Cobalt transporter ATP-binding subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8N8_9CLOT
Cobalt transporter ATP-binding subunit {ECO:0000313|EMBL:CCX50594.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
cbiO; ABC transporter
L1_008_000M1_scaffold_5425_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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935..1738
DNA (804bp) protein (268aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5P4_9CLOT
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
cobalt transport protein
L1_008_000M1_scaffold_5425_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1729..2136
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50592.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_5425_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2133..2894
DNA (762bp) protein (254aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGM5_9CLOT
L1_008_000M1_scaffold_5425_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2888..3853
DNA (966bp) protein (322aa)
Glyoxylate reductase (NADP(+)) n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4W7_9CLOT
Glyoxylate reductase (NADP(+)) {ECO:0000313|EMBL:CCX50590.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
L1_008_000M1_scaffold_5425_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4211..5569
DNA (1359bp) protein (453aa)
RmuC domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6J4_9FIRM
RmuC domain protein {ECO:0000313|EMBL:EEF68417.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L1_008_000M1_scaffold_5425_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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5663..6367
DNA (705bp) protein (235aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FP83_9FIRM
L1_008_000M1_scaffold_5425_8
unknown

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6393..6605
DNA (213bp) protein (71aa)

This feature has no annotations

L1_008_000M1_scaffold_5425_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6859..7908)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BH87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50821.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Displaying 9 items

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