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L1_008_000M1_scaffold_1809_5

Organism: dasL1_008_000M1_concoct_27_fa

near complete RP 43 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(3351..6797)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 1148.0
  • Bit_score: 1649
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCZ6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 1148.0
  • Bit_score: 1649
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 1124.0
  • Bit_score: 1023
  • Evalue 4.30e-296

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Taxonomy

Clostridium sp. CAG:226 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3447
ATGAATAAGCATCCGCTCATTGAGTTTCTCGGCAGGCACCCGGAATACCGGCGGCTGCGGGAAGCGCTGATGAAAAATGAAGGTGCCGCAGCCGTATTCGGCCTTGGCGAAGCGCACCGCGCGCATATGGCGGCAGCGCTGTTTTGCGATACGGGAAAAACCGTGCTCGTGGTTACGGCAAACGAAGCTTCCGCCATGCGCATCCGGGAAGAGGCGGCGGTTTATGCGCCTGCCGCAATCCATTTGCCCGCGCGCGATATGCCGCTTGCCGGGCGCGGCTTCACGGCGTCGGCCGGGCTTGCGGCGCGCCGCGTAAAGGCGCTTTCCGGGCTGCTTCGCGGGGAAAACATGCTCGTCACCGTTTCCGCAGCCGCGCTGCTGCAGCGCCTTACCCCGCCGGGAGCGCTTCGCACGATGACGACAGAGATCCGTGCAGGAGAGGCGGTCAAGCCGCAGACGCTGCTCAAACGACTGGTCGATGCGGGCTATGAGCGCGTGGAGGTTTGTGAGGCGAAGGGGCAGGTTTGCCTGCGCGGCGGGTATCTTGATGTGTTCCCAATCACCGCGGAAAACCCGGTGCGCATCGAGTTTTTTGATGACGAAATCGACACCATGCGCACCTACGACGCGCTTTCGCAGCGCTCCATTGAAAACGTTGAGGCGGTCACCGTTCCCCCCGCAGGCGAGATGCCCCTGACCGAAGCGGCGCGTGCGCGGGCTTTGCGCGCATTCAAAAAGAAGCCGCGCCTTTCGGAAGAACTTGCCGTGCTTTCTGCGGGTGGAACGCCTGCGGGGGCGGAACTTTTCATGCCGCTGTTCTATGACGATGCGTATTTGCAGGATTATCTTTCGGAGGATGCCATTCTCCTCATCGATGAGCCGCAGCGCGTGGAGGAAAGCGCGAAGGTGGCGCACATGGAGCACCTTGACACCGTGTCCGCGCTGCTTGCGGACGGAAACGCAGAGCCGGAGCAGGCAGAACTGCTTGGGCGGCCTTCCGTCCTCCTTGCACAGCTCGATACGCCGCGCACCGCGACGCTGTTCGCGCTTACGCGCACATACGGCCTGATCGCCCCCAAATGCCTGTTCCGCTTTGAAACGCGCCCTGCGACAAAATACCTCGCAGCGCAGGACATCCTTGCTTCAGACGTTGCGTCCTGGCGAAAAGCGGGAACGACAGCAGTCATCTATGCGGGAAGCCATTCGGTGCGCCTGCAGGACCAGCTGCCCGATATGGATGTGCATGCCGCCGTAACGGATGCGCTCACACGGCCGCTTGTGCCGGGCGAGGTCATCATTACGGGCGAATCCATTGAAAAGGGCTTTGAATACCCGGAGATCAAGCTTGTGGCCGTAAGCGAGGCGGAGCTTTACGGCGCGGTGCAGAAAAAGGCGGCCGCCGCACATAAAAAGCGTCCGCAGCTTGCCTTTTCGGAGCTTTCCGTGGGCGACCTTGTGGTGCATGAACTGCACGGCGTAGGACGTTTTGTCGGGGTGATTACGCTTACCGTGGGCGGCGTAACCCGGGATTACCTGCACCTTGCCTATGCGGGAGGAGAAAAACTTTATATCCCGACGGATCAGTTGGATCGGGTACAGAAATACATCGGCGGGGAAGAGGAAAGCGTCCGCCTTTCCAAACTCGGTTCCGGGGACTGGCAGCGCACCGTTTCCCGCACGCGGGAAAGCGTGAAAAAGCTGGCGTTTGACCTTGTACGGCTGTATGGCGAACGCATGAACCGCAAGGGCTTTGCGTTTTCACCGGATACCGCGTGGCAGACGCGGCTGGAGGAAAGCTTCCCATATGAAGAAACGCCGGATCAGCTCACCTGCATCGCGGAGATCAAAAAGGACATGGAGTCCTCCCGCGTGATGGACCGCCTGCTCTGCGGCGACGTGGGCTACGGCAAAACAGAGGTCGCTTTGCGCGCGGCCTTTAAGGCTGTGATGGACAGCAAGCAGGTGGCGTTCCTCGTGCCGACCACCATCCTGGCGCAGCAGCATTACAACACGCTCGCCGCGCGCTTTGCGGGATTCCCGGTGAACGTAGCGCTGCTTTCGCGCTTTAAGGCCGGCAAAGACGAAAAAACCATCCTTGAGGGGCTTGCAAAGGGCAGCATTGATGTGGTGATCGGCACGCACAAGCTGCTTGGCAAAAGCGTGCGCTTCAAGGACCTTGGGTTGCTCATCATCGACGAGGAACAGCGCTTCGGCGTGGGGCATAAAGAGCAGATCAAAAACATCAAGCAAAGCGTGGATGTGCTGACCCTGTCCGCTACGCCCATCCCCCGCACGCTGCATATGTCGATGACGGGGATCCGGGACATGTCCGTCATCGAAACGCCGCCCGAACAACGCTACCCGGTGCAGACCTATGTGATGGAATACAGCGACGGCATGGCACGGGAAGCGATCCTGAAGGAGATCGGCCGCGGCGGGCAGGTATATTTCGTTTACAACCGTGTGCGCAACATGGAACGCTTTGCAGAGCAGCTGCGCGCGCTTGTGCCGGAAGCGCGCATCGGGTATGCCCACGGGCAGATGCCCGAACAGCAGCTGGAACAGACGATGCTCGATTTCATGGAACAGCGCTACGACGTGCTCCTGTGCAGCACGATCATCGAAAGCGGGCTGGATATCCCAAACGTGAATACCATTCTGGTCTATGAGGCGGACAGGATGGGGCTTTCCCAGCTCTATCAGCTTCGCGGCCGCGTGGGGCGCGGAGCCAGGTTGGGTTACGCATACCTGACCTTCATGCGGGATAAGGTGCTTACAGAGGTCGCGGAGAAGCGCCTTTCGGCCATCCGGGAGTTCACGCAGTTTGGAGCCGGGTTCAAGATTGCCATGCGGGATTTGGAGATCCGCGGCGCGGGCAATTTGCTCGGGCCTGAACAGCATGGGCACATGGCAGCCGTCGGGTATGACCTGTATTGCAAGATTGTCAACAGCGCGGTGAAGGAGGCGCGCGGGGAAGCCGAGCCGCGCGCCATAGAAACGGTAATGGATGTGCCGCTTTCGGCGGCAATCCCGCATCCGTATATCCCGCGGGAAACGGAGCGGCTTTCGATGTACAAGCGCATCGCGCTCATCGCCTCGCGGGAGGATCTTTACGATGTGCAGGATGAGCTGATCGACCGCTACGGCGAGATCCCGCCGGAAACGAAGAACCTGCTCGACATCGCGCTCATCAAAGCGGAAGCGTCCCACGCACACATTGCCCAGCTTTCCGTGCGGGATGGCGAAGTGCGCTTTACGTTTGATAAGGACGCACCCATGAACGGGCAGAAACTTTTGAAGGCCATCGGCGAGATCCCGGGCGCGCAGTTCCTAAACGGCGAAGTTCCGGCGATTTCGGTCCGCATGCCGCGCGCGGATGCCGAAAAACTTTGTGGCATGCTGCCACAGTTTGTTTACACCCTTGCCGATTGTATTGAGGCAAATTGA
PROTEIN sequence
Length: 1149
MNKHPLIEFLGRHPEYRRLREALMKNEGAAAVFGLGEAHRAHMAAALFCDTGKTVLVVTANEASAMRIREEAAVYAPAAIHLPARDMPLAGRGFTASAGLAARRVKALSGLLRGENMLVTVSAAALLQRLTPPGALRTMTTEIRAGEAVKPQTLLKRLVDAGYERVEVCEAKGQVCLRGGYLDVFPITAENPVRIEFFDDEIDTMRTYDALSQRSIENVEAVTVPPAGEMPLTEAARARALRAFKKKPRLSEELAVLSAGGTPAGAELFMPLFYDDAYLQDYLSEDAILLIDEPQRVEESAKVAHMEHLDTVSALLADGNAEPEQAELLGRPSVLLAQLDTPRTATLFALTRTYGLIAPKCLFRFETRPATKYLAAQDILASDVASWRKAGTTAVIYAGSHSVRLQDQLPDMDVHAAVTDALTRPLVPGEVIITGESIEKGFEYPEIKLVAVSEAELYGAVQKKAAAAHKKRPQLAFSELSVGDLVVHELHGVGRFVGVITLTVGGVTRDYLHLAYAGGEKLYIPTDQLDRVQKYIGGEEESVRLSKLGSGDWQRTVSRTRESVKKLAFDLVRLYGERMNRKGFAFSPDTAWQTRLEESFPYEETPDQLTCIAEIKKDMESSRVMDRLLCGDVGYGKTEVALRAAFKAVMDSKQVAFLVPTTILAQQHYNTLAARFAGFPVNVALLSRFKAGKDEKTILEGLAKGSIDVVIGTHKLLGKSVRFKDLGLLIIDEEQRFGVGHKEQIKNIKQSVDVLTLSATPIPRTLHMSMTGIRDMSVIETPPEQRYPVQTYVMEYSDGMAREAILKEIGRGGQVYFVYNRVRNMERFAEQLRALVPEARIGYAHGQMPEQQLEQTMLDFMEQRYDVLLCSTIIESGLDIPNVNTILVYEADRMGLSQLYQLRGRVGRGARLGYAYLTFMRDKVLTEVAEKRLSAIREFTQFGAGFKIAMRDLEIRGAGNLLGPEQHGHMAAVGYDLYCKIVNSAVKEARGEAEPRAIETVMDVPLSAAIPHPYIPRETERLSMYKRIALIASREDLYDVQDELIDRYGEIPPETKNLLDIALIKAEASHAHIAQLSVRDGEVRFTFDKDAPMNGQKLLKAIGEIPGAQFLNGEVPAISVRMPRADAEKLCGMLPQFVYTLADCIEAN*