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L1_008_000M1_scaffold_1809_10

Organism: dasL1_008_000M1_concoct_27_fa

near complete RP 43 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 13545..14105

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4M5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 180.0
  • Bit_score: 308
  • Evalue 2.40e-81
Ribosomal subunit interface protein {ECO:0000313|EMBL:CCX50248.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 180.0
  • Bit_score: 308
  • Evalue 3.30e-81
sigma 54 modulation protein / 30S ribosomal protein S30P similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 182.0
  • Bit_score: 209
  • Evalue 7.20e-52

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Taxonomy

Clostridium sp. CAG:226 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 561
GTGAAAGGGGTAAGAAGGATGCGTATCACAATCACCGGCAAGAACATCGAAGTTTCTGATTACCTGAACGATCTCGTCATCAAAAAGGTAAGCAAGCTGGACAAGTATTTCCCCGAGGATACCGAGGCACATGTCACGTTGGCGGTGGAACGCAACCGCCATATCGTAGAAGTCACCATCCCCTATACCGGCGGCATCATCCGCGGTGAAGAGACTTCCGGCGACATGTATGCTTCCATCGATAACGTTCTCGCCAAGTTGGAAAAGCAGATTATGCGGCACCGCACCAAGCTGGAAAAGAGCCTGCGAGCGGGCGCGTTCAAAGCGCCGGAACCCGTGTTTGCGGATTCGTTCAGCGCGGATGAGGACGAAATGGAAGAAGCGCCGCGCGTAGTAAAGGTTAAGCGCTTCGACATCAAGCCCATGACCGTGGAAGAGGCTATGCTTCAGCTTGAATTGCTCGGCCACTCGTTCTATATGTTCACCAACGGCGATTCCGGCCAGATCAACGTCATCTATAAGCGCAAGGATGGTAATTTTGGCCTCATCGAGCCCGAATAA
PROTEIN sequence
Length: 187
VKGVRRMRITITGKNIEVSDYLNDLVIKKVSKLDKYFPEDTEAHVTLAVERNRHIVEVTIPYTGGIIRGEETSGDMYASIDNVLAKLEKQIMRHRTKLEKSLRAGAFKAPEPVFADSFSADEDEMEEAPRVVKVKRFDIKPMTVEEAMLQLELLGHSFYMFTNGDSGQINVIYKRKDGNFGLIEPE*