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L1_008_000M1_scaffold_1817_11

Organism: dasL1_008_000M1_concoct_27_fa

near complete RP 43 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 10113..10646

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 177.0
  • Bit_score: 293
  • Evalue 1.10e-76
2'-5' RNA ligase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDD6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 177.0
  • Bit_score: 293
  • Evalue 7.50e-77
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 180.0
  • Bit_score: 116
  • Evalue 6.10e-24

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Taxonomy

Clostridium sp. CAG:226 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 534
ATGCGCCTTTTTATCGCCATTGAACTGCCGCGCTCGTTCAAACAGGAACTTGCGCGCGTGCAGAAGGAAGTCAAGCAGATGAGCTGCGGCGGCAGGTTTGTGCCGCAGGAAAATTTCCACATCACGCTGCATTTCATCGGGGAATCGGATGACCTCGCCGGCGCGGTCGCTGTGATGCGTGAGGCCGCGCGCGGTATCCGCACATTTACGCTGCATCTTGGCAAATATGACTGCTTCGATAAAAACGGCAGTAAGACCTCCTTCCTGAATGTAAAAGGAGAGCTGGACGAGCTGGACCGGCTGTATGAATCGCTGCAGAGCGCGCTGTATGACAACGGGTTTTCCCGCGAGCGCAAGCGTTTTCGCCCGCACATTACGCTCGGGCGCAACGTGGAGCACGACGAACTTGTGACGGAGGAGCTCAAGCGCCTTTCCCCCAATGCTTCGATGACCGTACAGGGCATCACGCTGTTTGAAAGCGCGCGCCAGGAAGGCAAAGTGGTTTATAATCCGCTGCACCGGGAGCGCTTCTGA
PROTEIN sequence
Length: 178
MRLFIAIELPRSFKQELARVQKEVKQMSCGGRFVPQENFHITLHFIGESDDLAGAVAVMREAARGIRTFTLHLGKYDCFDKNGSKTSFLNVKGELDELDRLYESLQSALYDNGFSRERKRFRPHITLGRNVEHDELVTEELKRLSPNASMTVQGITLFESARQEGKVVYNPLHRERF*