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L1_008_000M1_scaffold_2294_13

Organism: dasL1_008_000M1_concoct_27_fa

near complete RP 43 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(9815..10528)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:138 RepID=R6BEK6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 227.0
  • Bit_score: 255
  • Evalue 5.20e-65
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 227.0
  • Bit_score: 255
  • Evalue 7.30e-65
RpoD; sporulation sigma factor SigK similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 212.0
  • Bit_score: 250
  • Evalue 4.70e-64

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Taxonomy

Clostridium sp. CAG:138 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 714
ATGCTTGATTTTATTTTTCAGCTTTTCAAAGACATCTTCTTTTTTGCAGGATATGTTGGGACGAACGGCTCTTTCCCGGAACCGCTTTCGCAGGAAGAGGAGCGCGCATGTCTCCTGCGCCTTGCGCAAGGCGACGCGTCTGCCCGCACGGCGCTGATTGAACACAATCTGCGCCTTGTTGCGCACATTGCAAAAAAATACGCAGGCCCGCGGCGCGATCAGGATGATCTGATCTCCATCGGCACGGTAGGACTAATCAAAGCCGTTTCCACATTTGATCCGGAAAAGAACAGCACGCTTGCAACCTATGCGGCACGATGCATCGAAAACGAAATCCTCATGTCGCTGCGGGCAGAAAAAAAGCAGAACGGCGAGGTTTCATTGAGCGACCCAATCGGCGTAGACGGAGACGGCAATGAAATCTCCCTTGCAGACATCCTCGGTTCCGATCCCGATCAGGTGCAGCGGGATGTGGAGAGCCGCATTGCATCCGAACAGGTGCGGTGTGCGGTGGACGCGGCGCTTTCCGGGCGGGAACGAACGGTAATTAAGCTGCGCTATGGCCTCATTGGAGGGCGCTGCATGCCGCAGCGTGAAGTGGCGGCGCTGCTGGGGATTTCCCGCAGTTATGTATCGCGGTTGGAAAAGAAAGCAATTGGAAAGCTCAATGCGCACTTGGGGCAAGGAGAATCCGTGCTGCGGCAGAGAAATTGA
PROTEIN sequence
Length: 238
MLDFIFQLFKDIFFFAGYVGTNGSFPEPLSQEEERACLLRLAQGDASARTALIEHNLRLVAHIAKKYAGPRRDQDDLISIGTVGLIKAVSTFDPEKNSTLATYAARCIENEILMSLRAEKKQNGEVSLSDPIGVDGDGNEISLADILGSDPDQVQRDVESRIASEQVRCAVDAALSGRERTVIKLRYGLIGGRCMPQREVAALLGISRSYVSRLEKKAIGKLNAHLGQGESVLRQRN*