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L1_008_000M1_scaffold_2294

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2294_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1072
DNA (1071bp) protein (357aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCI2_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CCX50542.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_2294_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1154..1525)
DNA (372bp) protein (124aa)
Ribosomal silencing factor RsfS n=1 Tax=Clostridium sp. CAG:226 RepID=R5B495_9CLOT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
iojap-like ribosome-associated protein
L1_008_000M1_scaffold_2294_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1570..2751)
DNA (1182bp) protein (394aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B799_9CLOT
nicotinate (nicotinamide) nucleotide adenylyltransferase/conserved hypothetical protein TIGR00488
L1_008_000M1_scaffold_2294_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2881..3735
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50095.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_2294_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3732..4019)
DNA (288bp) protein (96aa)
Predicted RNA-binding protein containing KH domain n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4P7_9CLOT
Predicted RNA-binding protein containing KH domain {ECO:0000313|EMBL:CCX50278.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative RNA-binding protein, YhbY family
L1_008_000M1_scaffold_2294_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4046..5320)
DNA (1275bp) protein (425aa)
GTPase Obg n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBQ3_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
obgE; GTPase ObgE
L1_008_000M1_scaffold_2294_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5321..5986)
DNA (666bp) protein (222aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFQ4_9CLOT
L1_008_000M1_scaffold_2294_8
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6067..6855)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FMY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGW40956.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
hypothetical protein
L1_008_000M1_scaffold_2294_9
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6857..7660)
DNA (804bp) protein (268aa)
Putative ABC transporter permease protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W522_DESAS
ABC transporter permease
Putative ABC transporter permease protein {ECO:0000313|EMBL:ACV61374.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
L1_008_000M1_scaffold_2294_10
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7657..8631)
DNA (975bp) protein (325aa)
ABC transporter family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FMY7_9FIRM
ABC transporter family protein {ECO:0000313|EMBL:EGW40958.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
natA2; ATP-binding transport protein NatA
L1_008_000M1_scaffold_2294_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8822..9337)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2R0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49880.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_2294_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9465..9761
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6M3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49879.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_2294_13
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9815..10528)
DNA (714bp) protein (238aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:138 RepID=R6BEK6_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
RpoD; sporulation sigma factor SigK
L1_008_000M1_scaffold_2294_14
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(10772..12262)
DNA (1491bp) protein (497aa)
adenosylcobyric acid synthase (glutamine-hydrolysing) (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2J8_9BACT
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscolens W5455.;"
L1_008_000M1_scaffold_2294_15
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(12255..13292)
DNA (1038bp) protein (346aa)
threonine-phosphate decarboxylase (EC:4.1.1.81)
Threonine-phosphate decarboxylase {ECO:0000313|EMBL:AEF84311.1}; EC=4.1.1.81 {ECO:0000313|EMBL:AEF84311.1};; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
Threonine-phosphate decarboxylase n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YLB4_TREPZ
L1_008_000M1_scaffold_2294_16
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13279..13479)
DNA (201bp) protein (67aa)
adenosylcobinamide-phosphate synthase (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZW2_9FIRM
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L1_008_000M1_scaffold_2294_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13657..14244)
DNA (588bp) protein (196aa)
cobD; cobalamin biosynthesis protein CobD (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B684_9CLOT
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L1_008_000M1_scaffold_2294_18
Methanobrevibacter ruminantium, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(14241..15110)
DNA (870bp) protein (290aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=634498 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM; 13430 / M1) (Methanobacterium ruminantium).;"
Putative cobalt-precorrin-6A synthase [deacetylating] n=1 Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E2H7_METRM
cbiD; cobalamin biosynthesis protein CbiD
Displaying 18 items

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