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L1_008_000M1_scaffold_3941_4

Organism: dasL1_008_000M1_concoct_27_fa

near complete RP 43 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(1539..2447)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 291.0
  • Bit_score: 347
  • Evalue 1.40e-92
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 300.0
  • Bit_score: 240
  • Evalue 4.80e-61
tRNA pseudouridine synthase B n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGT4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 291.0
  • Bit_score: 347
  • Evalue 9.80e-93

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Taxonomy

Clostridium sp. CAG:226 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 909
ATGGAAGGAATTGTAAATGTTCTGAAGCCGCCGGGTATGACTTCGTCGAATGCGGTGGCGGATGTAAGGCATCTTTTTGACATGAAGCGCGTAGGGCATACGGGCACGCTGGATCCCGGGGCGGCGGGCGTATTGCCGATCTGCCTCGGACGGGCTACGCGCTTGTTTGACTACCTTGTGGATAAGGAAAAGGAGTATTATGCGGAGGTGGCCTTCGGGTGCGCCACCGATACGCAGGACTCCTACGGCACGGTGATTGCATGCGGCGAAGGGATTGTCCGCATGGAGCAACTGCAAGCGGTGCTCCCGGCGTTTATCGGCGAGATTGAGCAGGTCGCGCCGATGTATTCCGCCGTATGTGTGGATGGAAAGCGGCTTTACCAGCTCGCCCGCCAAGGAGCGGAGGAGATCCGAAAAACACGCCGTGTTCTGGTGCATGCTCTGGAGCCTGTTGCTCAGACGGGGGAAAACCGCTTTTTGCTGCGCGTGCAATGCTCAAAGGGCACGTATGTCCGCACGCTCTGCCATGATATCGGCATGGCGCTCGGCATCCCGGCACACCTTTCGTTTTTGCTGCGCACGCGTTCCGGCGCGTTCGATGTGGAAGGGGCGCACTCCATCGCCGAGTTGCGGGAACTGAAGGAAGCCGGGGCGCTTGCAAGCGCGGTCGTCAGCGTGGAGCACGCACTGCTCCATTTGCCGGAAGCGCGTCTTGACGGCCTTTCTGCACGCAACGCACGGCTTCTGAAAAACGGTGCGGAGATCGCGCATCCTGCGCTTGCAGCCTTGCCGGAGCATACGCCGCTTCGCGCTTATGCTAACGGCGCATTTTTAGGCGTTGGGTTGATCGGGGCAGGAAAGCTGCACATTACTACGTTCTTTGGGGAGGAAGCGGAGCATGAAAATTAA
PROTEIN sequence
Length: 303
MEGIVNVLKPPGMTSSNAVADVRHLFDMKRVGHTGTLDPGAAGVLPICLGRATRLFDYLVDKEKEYYAEVAFGCATDTQDSYGTVIACGEGIVRMEQLQAVLPAFIGEIEQVAPMYSAVCVDGKRLYQLARQGAEEIRKTRRVLVHALEPVAQTGENRFLLRVQCSKGTYVRTLCHDIGMALGIPAHLSFLLRTRSGAFDVEGAHSIAELRELKEAGALASAVVSVEHALLHLPEARLDGLSARNARLLKNGAEIAHPALAALPEHTPLRAYANGAFLGVGLIGAGKLHITTFFGEEAEHEN*