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L1_008_000M1_scaffold_4142_8

Organism: dasL1_008_000M1_concoct_27_fa

near complete RP 43 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(7138..8079)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 313.0
  • Bit_score: 554
  • Evalue 5.90e-155
DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 315.0
  • Bit_score: 478
  • Evalue 1.40e-132
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3L1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 313.0
  • Bit_score: 554
  • Evalue 4.20e-155

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Taxonomy

Clostridium sp. CAG:226 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 942
ATGATAGAAATCGAAAGACCGAAAATCGAATGCGTAGAGCTGACCGAGGATTACGGCAAATTCGTGGTGGAACCGCTGGAACGCGGGTTTGGCACGACGCTGGGCAACTCCCTCCGCAGGGTGCTGCTTTCCTCCCTGCCCGGTGTGGCGGCTTCGTCCATCAAGATCGATGGCGTATTGCATGAGTTTTCGACCGTGGAAGGCGTCAAGGAAGATGTCACGGAAATCGTCCTTAACATTAAGGAACTGTGCGTGAAACTGCACAGCGAGGGCGCGAAGAAGGTCATTATTGACGCTCGTGGCGAATGCGAAGTCAAGGCCGGCGATATCATCGCCGACGCGGATGTGGAGATCGTAAACCCGGAACTGCACATTGCGACCCTTGGCCCCAACGCCAGGCTCTATATGGAGATCATCCTCGAACGCGGGCGCGGCTATGTTTCTGCAGATAAGAACAAGAAGCCGGATATGCCCATTGGTCAGATCGCGATCGACTCCATATTCACCCCGATCCGCAAGGTCAACTTCCGTGTGGAGGATACGCGCGTAGGTCAGATTACGGACTACGACATGCTTACGCTGGAGGTTTGGACGGATGGCAGCATCAAGCCGGACGAGGCCGTGAGCCTTGCGGCTAAGATCCTTACGGAGCACCTGATGCTGTTCATCAACCTCACTGAGCATGTGCAGGGCGTGGAGATCATGGTCGAAAAGGAAGAGGACAAGAAGGAAAAGATTCTCGAGATGACCATCGAGGAGCTCGACCTTTCCGTCCGTTCCTACAACTGCCTCAAACGCGCGGGCATCAACACCGTGGAGGAATTGGTGATGCGCAACGAGGAAGAAATGATGAAGGTTCGCAACCTCGGGCGCAAGTCGCTTGAGGAAGTCCAGCAGAAGCTGGTTGGACTGGGCCTTTCGCTCCGGCATAACGAAGACTAA
PROTEIN sequence
Length: 314
MIEIERPKIECVELTEDYGKFVVEPLERGFGTTLGNSLRRVLLSSLPGVAASSIKIDGVLHEFSTVEGVKEDVTEIVLNIKELCVKLHSEGAKKVIIDARGECEVKAGDIIADADVEIVNPELHIATLGPNARLYMEIILERGRGYVSADKNKKPDMPIGQIAIDSIFTPIRKVNFRVEDTRVGQITDYDMLTLEVWTDGSIKPDEAVSLAAKILTEHLMLFINLTEHVQGVEIMVEKEEDKKEKILEMTIEELDLSVRSYNCLKRAGINTVEELVMRNEEEMMKVRNLGRKSLEEVQQKLVGLGLSLRHNED*