ggKbase home page

L1_008_000M1_scaffold_4142

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_4142_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..741)
DNA (741bp) protein (247aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Cobalt ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4X1_9CLOT
ABC-type cobalt transport system, ATPase component
L1_008_000M1_scaffold_4142_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(897..2642)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9M3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50974.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_4142_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2730..3671)
DNA (942bp) protein (314aa)
Hypothetical membrane protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGM9_9CLOT
Hypothetical membrane protein {ECO:0000313|EMBL:CCX50596.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Tim44-like domain.
L1_008_000M1_scaffold_4142_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3894..4283
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50597.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_4142_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4386..5534
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3K2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97743.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L1_008_000M1_scaffold_4142_6
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(5588..6505)
DNA (918bp) protein (306aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
glutaminase (EC:3.5.1.2)
Glutaminase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEU8_9FIRM
L1_008_000M1_scaffold_4142_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6629..7120)
DNA (492bp) protein (164aa)
50S ribosomal protein L17 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAJ2_9CLOT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
50S ribosomal protein L17
L1_008_000M1_scaffold_4142_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7138..8079)
DNA (942bp) protein (314aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3L1_9CLOT
L1_008_000M1_scaffold_4142_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8139..8768)
DNA (630bp) protein (210aa)
30S ribosomal protein S4 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6M8_9CLOT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rpsD; SSU ribosomal protein S4p (S9e)
Displaying 9 items

View Taxonomy