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L1_008_000M1_scaffold_4703_6

Organism: dasL1_008_000M1_concoct_27_fa

near complete RP 43 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(6299..6856)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=2 Tax=unclassified Lachnospiraceae RepID=R9JAE8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 185.0
  • Bit_score: 232
  • Evalue 2.20e-58
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS30966.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 185.0
  • Bit_score: 232
  • Evalue 3.00e-58
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 186.0
  • Bit_score: 189
  • Evalue 5.90e-46

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Taxonomy

Lachnospiraceae bacterium 28-4 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 558
ATGCAGGATTCTGAGATCATTGCGCTTTATTGGCAGCGGGACGAGGCAGCTATCGCCGAAACAAGCCGGAAATACGGCGCATATTGCTTCCGCATTGCCGGGAATATCCTGACGGCAAAGGAAGATGCCGAAGAATGTGTGAACGATGCATACCACCGGGCTTGGAATGCGATCCCGCCGGAGCGGCCCGAGCATCTTGGCGCGTGGCTCGGGCGGGTTGTGCGCAACGTGGCGCTTGGCCGCTGGCAGCATGCGCATGCCCGGAAGCGCAACAGAGGCATGACTACGCTTTTAAGCGAGCTTGAGGATTGCATCCCTTCTCCGCAGAACGTTGAAACGGCGTTGGACGAACGGGAATTGGGCGAGCGCATCAGCATATGGCTGCGCTCCCTGCCGCAGGAGGACCGCATCCTGTTCGTGCGCCGCTACTGGTATGGTGTGCCGCTCAATGCGCTTGCCAAGGAGCAGCACAGCCCGCCGGCACGGTTGGCACAGCGGATGTACCGGCTGCGCGGAGCGCTTAAGGCTGAACTCGAAAGGGAGGGGATCGTTTTATGA
PROTEIN sequence
Length: 186
MQDSEIIALYWQRDEAAIAETSRKYGAYCFRIAGNILTAKEDAEECVNDAYHRAWNAIPPERPEHLGAWLGRVVRNVALGRWQHAHARKRNRGMTTLLSELEDCIPSPQNVETALDERELGERISIWLRSLPQEDRILFVRRYWYGVPLNALAKEQHSPPARLAQRMYRLRGALKAELEREGIVL*