ggKbase home page

L1_008_000M1_scaffold_4703

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_4703_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(172..2043)
DNA (1872bp) protein (624aa)
VanW-like protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B640_9CLOT
VanW-like protein {ECO:0000313|EMBL:CCX49664.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
von Willebrand factor A
L1_008_000M1_scaffold_4703_2
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2313..3017)
DNA (705bp) protein (235aa)
XRE family transcriptional regulator n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035D3E0A
transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADZ83959.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L1_008_000M1_scaffold_4703_3
Enterococcus caccae, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3007..4542)
DNA (1536bp) protein (512aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1158612 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus caccae ATCC BAA-1240.;"
kdpD; osmosensitive K+ channel His kinase sensor domain protein (EC:2.7.3.-)
Uncharacterized protein n=1 Tax=Enterococcus caccae ATCC BAA-1240 RepID=R3U7L0_9ENTE
L1_008_000M1_scaffold_4703_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4822..5061
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W261_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37242.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L1_008_000M1_scaffold_4703_5
unknown

Not on your lists

comp(5145..6302)
DNA (1158bp) protein (386aa)

This feature has no annotations

L1_008_000M1_scaffold_4703_6
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6299..6856)
DNA (558bp) protein (186aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=unclassified Lachnospiraceae RepID=R9JAE8_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS30966.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
ECF subfamily RNA polymerase sigma-24 factor
L1_008_000M1_scaffold_4703_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7014..7823)
DNA (810bp) protein (270aa)
60 kDa chaperonin n=1 Tax=Clostridium sp. CAG:226 RepID=R5B321_9CLOT
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
chaperonin GroL
Displaying 7 items

View Taxonomy