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L1_008_000M1_scaffold_3132

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3132_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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447..1628
DNA (1182bp) protein (394aa)
Trigger factor n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWB6_9FIRM
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
trigger factor
L1_008_000M1_scaffold_3132_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2129..3466
DNA (1338bp) protein (446aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
pgiA; Glucose-6-phosphate isomerase A (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFX3_9FIRM
L1_008_000M1_scaffold_3132_3
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3539..3958
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LK89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS58766.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L1_008_000M1_scaffold_3132_4
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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4061..4360
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S4B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45689.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L1_008_000M1_scaffold_3132_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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4393..4956
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YAH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13408.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
VanZ like family.
L1_008_000M1_scaffold_3132_6
unknown

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5023..5184
DNA (162bp) protein (54aa)

This feature has no annotations

L1_008_000M1_scaffold_3132_7
unknown

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5218..5307
DNA (90bp) protein (30aa)

This feature has no annotations

L1_008_000M1_scaffold_3132_8
unknown

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comp(5343..5513)
DNA (171bp) protein (57aa)

This feature has no annotations

L1_008_000M1_scaffold_3132_9
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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5611..5829
DNA (219bp) protein (73aa)
Putative Xre family DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IGD2_9FIRM
putative Xre family DNA-binding protein
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:CDB44446.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
L1_008_000M1_scaffold_3132_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6250..7470)
DNA (1221bp) protein (407aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFX4_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDS09562.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L1_008_000M1_scaffold_3132_11
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7697..8809)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LJL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS55937.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Predicted RNA-binding protein
L1_008_000M1_scaffold_3132_12
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8837..9877)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CH75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA76018.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L1_008_000M1_scaffold_3132_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9874..10254)
DNA (381bp) protein (127aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Alistipes sp. CAG:29 RepID=R6XKD4_9BACT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_008_000M1_scaffold_3132_14
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10251..10613)
DNA (363bp) protein (121aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Ribonuclease P protein component n=1 Tax=Clostridium sp. CAG:217 RepID=R6JPN8_9CLOT
ribonuclease P protein component
L1_008_000M1_scaffold_3132_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10792..10926)
DNA (135bp) protein (45aa)
Ribosomal protein L34 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGG4_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
50S ribosomal protein L34
Displaying 15 items

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