ggKbase home page

L1_008_000M1_scaffold_1148

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1148_1
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

623..1942
DNA (1320bp) protein (440aa)
GTPase Der n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LHM5_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
ribosome-associated GTPase EngA
L1_008_000M1_scaffold_1148_2
unknown

Not on your lists

1944..2405
DNA (462bp) protein (154aa)

This feature has no annotations

L1_008_000M1_scaffold_1148_3
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2604..3140
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JJB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS31237.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
Nitroreductase
L1_008_000M1_scaffold_1148_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3465..3974
DNA (510bp) protein (170aa)
50S ribosomal protein L10 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFZ5_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
rplJ; ribosomal protein L10
L1_008_000M1_scaffold_1148_5
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4042..4410
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBE4_9CLOT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
rplL; 50S ribosomal protein L7/L12
L1_008_000M1_scaffold_1148_6
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(4548..5039)
DNA (492bp) protein (164aa)
GCN5-related N-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HHL2_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCY27594.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative acetyltransferase
L1_008_000M1_scaffold_1148_7
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5070..5450)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6CAC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA62307.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L1_008_000M1_scaffold_1148_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5463..7280)
DNA (1818bp) protein (606aa)
Glycosidases (EC:3.2.1.41)
Alpha amylase, catalytic domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGD3_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EDS09721.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L1_008_000M1_scaffold_1148_9
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7796..10186)
DNA (2391bp) protein (797aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGD2_9FIRM
L1_008_000M1_scaffold_1148_10
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10369..10704
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LAY1_9FIRM
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L1_008_000M1_scaffold_1148_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10710..12770
DNA (2061bp) protein (687aa)
Peptidase, U32 family {ECO:0000313|EMBL:EDS09717.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDS09717.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGC9_9FIRM
L1_008_000M1_scaffold_1148_12
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12842..13276
DNA (435bp) protein (145aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Firmicutes RepID=R6PZN2_9FIRM
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:CDD60889.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L1_008_000M1_scaffold_1148_13
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13273..13962
DNA (690bp) protein (230aa)
Predicted membrane protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M669_9FIRM
Predicted membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CDD39183.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
L1_008_000M1_scaffold_1148_14
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13959..14486
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=R7AQ44_9BACE
isochorismatase hydrolase
Uncharacterized protein {ECO:0000313|EMBL:CDD55531.1}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides pectinophilus CAG:437.;"
L1_008_000M1_scaffold_1148_15
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14569..15159
DNA (591bp) protein (197aa)
Maf-like protein BN513_00686 n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVP1_9CLOT
Maf-like protein BN513_00686 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
septum formation protein Maf
L1_008_000M1_scaffold_1148_16
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15218..17458)
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12950.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L1_008_000M1_scaffold_1148_17
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17433..18329)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LKN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59153.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
ABC transporter
L1_008_000M1_scaffold_1148_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18329..18697)
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6X3_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDS12948.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
transcriptional regulator, GntR family
L1_008_000M1_scaffold_1148_19
Clostridium sp. CAG:762, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18930..19829)
DNA (900bp) protein (300aa)
Polysaccharide deacetylase n=1 Tax=Clostridium sp. CAG:762 RepID=R5TEZ3_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:CCZ57571.1}; TaxID=1262837 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:762.;"
polysaccharide deacetylase
L1_008_000M1_scaffold_1148_20
unknown

Not on your lists

comp(19844..20116)
DNA (273bp) protein (91aa)

This feature has no annotations

L1_008_000M1_scaffold_1148_21
Caldicellulosiruptor obsidiansis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

21448..22290
DNA (843bp) protein (281aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:ADL42094.1}; EC=2.5.1.54 {ECO:0000313|EMBL:ADL42094.1};; TaxID=608506 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TJB2_CALOO
L1_008_000M1_scaffold_1148_22
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22439..23683
DNA (1245bp) protein (415aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Fretibacterium fastidiosum RepID=D4M9G6_9BACT
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_1148_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24561..25652
DNA (1092bp) protein (364aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=2 Tax=Oscillibacter RepID=U2S6C0_9FIRM
L1_008_000M1_scaffold_1148_24
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25844..26101
DNA (258bp) protein (86aa)
tyrA; chorismate mutase (EC:5.4.99.5)
Chorismate mutase/prephenate dehydratase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7II92_9FIRM
Chorismate mutase/prephenate dehydratase {ECO:0000313|EMBL:CDE51514.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L1_008_000M1_scaffold_1148_25
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26104..26679
DNA (576bp) protein (192aa)
Acetyltransferase ribosomal protein N-acetylase n=1 Tax=Collinsella sp. CAG:289 RepID=R7D4L3_9ACTN
Acetyltransferase ribosomal protein N-acetylase {ECO:0000313|EMBL:CDD84467.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
acetyltransferase
L1_008_000M1_scaffold_1148_26
unknown

Not on your lists

comp(26892..27221)
DNA (330bp) protein (110aa)

This feature has no annotations

L1_008_000M1_scaffold_1148_27
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27413..27814)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A5V6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38273.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L1_008_000M1_scaffold_1148_28
unknown

Not on your lists

comp(28006..28272)
DNA (267bp) protein (89aa)

This feature has no annotations

L1_008_000M1_scaffold_1148_29
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28402..28878
DNA (477bp) protein (159aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
Phosphodiesterase family protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DSN3_CLOS4
metallophosphatase
L1_008_000M1_scaffold_1148_30
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29045..29470
DNA (426bp) protein (142aa)
Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 {ECO:0000256|HAMAP-Rule:MF_03036}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_03036};; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3); (Natronobacterium magadii).;"
Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0ASY8_9EURY
nucleoside 2-deoxyribosyltransferase
Displaying items 1-30 of 48 in total

View Taxonomy