ggKbase home page

L1_008_000M1_scaffold_1327

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1327_1
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(409..1188)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82344.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Predicted membrane protein
L1_008_000M1_scaffold_1327_2
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(1345..2997)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EI14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92018.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L1_008_000M1_scaffold_1327_3
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(3023..5377)
DNA (2355bp) protein (785aa)
ATP-dependent transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ETX3_9FIRM
ATP-dependent transcriptional regulator {ECO:0000313|EMBL:CCX92017.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
ATP-dependent transcriptional regulator
L1_008_000M1_scaffold_1327_4
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5914..7329
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I514_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA80067.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
Di-and tricarboxylate transporters
L1_008_000M1_scaffold_1327_5
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7412..8734
DNA (1323bp) protein (441aa)
FAD dependent oxidoreductase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTE6_SPHPG
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEV30187.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
L1_008_000M1_scaffold_1327_6
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8796..9749
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Bacillus fordii RepID=UPI00036CC9B7
LysR family transcriptional regulator
Bacterial regulatory helix-turn-helix, lysR family protein {ECO:0000313|EMBL:AJI23055.1}; TaxID=1348623 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus megaterium NBRC 15308 = ATCC 14581.;"
L1_008_000M1_scaffold_1327_7
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9827..11221)
DNA (1395bp) protein (465aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
asnS; Asparagine-tRNA ligase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LS74_9FIRM
L1_008_000M1_scaffold_1327_8
unknown

Not on your lists

11685..11921
DNA (237bp) protein (79aa)

This feature has no annotations

L1_008_000M1_scaffold_1327_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11935..13182)
DNA (1248bp) protein (416aa)
Putative proton/sodium-glutamate symport protein GltT n=2 Tax=Oscillibacter RepID=U2QM26_9FIRM
Putative proton/sodium-glutamate symport protein GltT {ECO:0000313|EMBL:ERK63861.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
GltP; Na+/H+-dicarboxylate symporter
L1_008_000M1_scaffold_1327_10
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13545..15047)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KH31_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK99839.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
L1_008_000M1_scaffold_1327_11
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15186..15713)
DNA (528bp) protein (176aa)
DNA-binding helix-turn-helix protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQK2_FILAD
Cro/CI family transcriptional regulator
Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:EFE29055.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
L1_008_000M1_scaffold_1327_12
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15806..16660)
DNA (855bp) protein (285aa)
PP-loop family protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XVU4_9FIRM
PP-loop family protein {ECO:0000313|EMBL:CDA19238.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
PP-loop domain-containing protein
L1_008_000M1_scaffold_1327_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(16938..18332)
DNA (1395bp) protein (465aa)
Putative voltage-gated chloride channel n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DDX6_9FIRM
Putative voltage-gated chloride channel {ECO:0000313|EMBL:CCX75047.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative voltage-gated chloride channel
L1_008_000M1_scaffold_1327_14
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18369..18521)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NIS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF12551.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
hypothetical protein predicted by Glimmer/Critica
L1_008_000M1_scaffold_1327_15
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18692..19021)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GL59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY17958.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
hypothetical protein
L1_008_000M1_scaffold_1327_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19069..19779)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75110.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_008_000M1_scaffold_1327_17
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19985..22534)
DNA (2550bp) protein (850aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDS12044.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EDS12044.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P918_9FIRM
hypothetical protein
L1_008_000M1_scaffold_1327_18
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(22560..22781)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D0J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81305.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L1_008_000M1_scaffold_1327_19
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(23242..24429)
DNA (1188bp) protein (396aa)
Putative sporulation integral membrane protein YlbJ n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUB1_9CLOT
Sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:ESL13363.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative membrane protein
L1_008_000M1_scaffold_1327_20
unknown

Not on your lists

comp(24384..24650)
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying 20 items

View Taxonomy