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L1_008_000M1_scaffold_1781

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1781_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..714)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27298.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_1781_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(711..1898)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HN03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27297.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_1781_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1895..2590)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27296.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_1781_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2664..3356)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GS66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27295.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_1781_5
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4091..4840)
DNA (750bp) protein (250aa)
Methyltransferase domain protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVD4_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:CDA63091.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Methyltransferase domain.
L1_008_000M1_scaffold_1781_6
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(4827..5129)
DNA (303bp) protein (101aa)
TrpR family protein YerC/YecD n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y5C9_9FIRM
TrpR family protein YerC/YecD {ECO:0000313|EMBL:CDD31148.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
TrpR-like protein YerC/YecD
L1_008_000M1_scaffold_1781_7
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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5279..5743
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AK90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX39761.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
L1_008_000M1_scaffold_1781_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(5861..7696)
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82064.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
histidine kinase
L1_008_000M1_scaffold_1781_9
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(7693..8388)
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D072_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA82063.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
two-component system signal transduction response regulator
L1_008_000M1_scaffold_1781_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(8468..9709)
DNA (1242bp) protein (414aa)
Glycosyltransferase group 2 family protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVU3_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDA82062.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
family 2 glycosyl transferase
L1_008_000M1_scaffold_1781_11
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10018..11370
DNA (1353bp) protein (451aa)
Magnesium transporter n=1 Tax=Clostridium sp. CAG:1024 RepID=R5APZ0_9CLOT
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
magnesium transporter
L1_008_000M1_scaffold_1781_12
unknown

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11532..12605
DNA (1074bp) protein (358aa)

This feature has no annotations

L1_008_000M1_scaffold_1781_13
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12659..13123)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XZP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55525.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L1_008_000M1_scaffold_1781_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13169..13567)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RX98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66275.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_008_000M1_scaffold_1781_15
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13913..14434)
DNA (522bp) protein (174aa)
Isopentenyl-diphosphate isomerase n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V579_CLOSS
Idi; isopentenyl-diphosphate isomerase
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|SAAS:SAAS00231155}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L1_008_000M1_scaffold_1781_16
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14492..15265)
DNA (774bp) protein (258aa)
uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
Uridine phosphorylase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NJW5_9FIRM
L1_008_000M1_scaffold_1781_17
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15296..16756)
DNA (1461bp) protein (487aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LWZ4_9FIRM
L1_008_000M1_scaffold_1781_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17039..18013)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z604_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ15477.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Site-specific recombinase XerD
L1_008_000M1_scaffold_1781_19
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18010..18321)
DNA (312bp) protein (104aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
mRNA interferase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QT85_ACEAZ
transcriptional modulator of MazE/toxin MazF
L1_008_000M1_scaffold_1781_20
unknown

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comp(18408..18683)
DNA (276bp) protein (92aa)

This feature has no annotations

L1_008_000M1_scaffold_1781_21
unknown

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comp(18709..18879)
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying 21 items

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