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L1_008_000M1_scaffold_206

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_206_1
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

718..1443
DNA (726bp) protein (242aa)
Probable transcriptional regulatory protein BN513_00233 n=1 Tax=Clostridium sp. CAG:169 RepID=R6C9V9_9CLOT
Probable transcriptional regulatory protein BN513_00233 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
conserved hypothetical protein TIGR01033
L1_008_000M1_scaffold_206_2
unknown

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1513..2166
DNA (654bp) protein (218aa)

This feature has no annotations

L1_008_000M1_scaffold_206_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2196..3788
DNA (1593bp) protein (531aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBX0_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL02333.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_206_4
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3980..4360)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EEF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG30144.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L1_008_000M1_scaffold_206_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4357..5040)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LUW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ93259.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted membrane protein
L1_008_000M1_scaffold_206_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5281..6759
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS08956.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Bacillus/Clostridium GerA spore germination protein.
L1_008_000M1_scaffold_206_7
unknown

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6704..7753
DNA (1050bp) protein (350aa)

This feature has no annotations

L1_008_000M1_scaffold_206_8
unknown

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7876..8868
DNA (993bp) protein (331aa)

This feature has no annotations

L1_008_000M1_scaffold_206_9
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9018..10238
DNA (1221bp) protein (407aa)
SpoIVB peptidase {ECO:0000313|EMBL:EDS08952.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDS08952.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
stage IV sporulation protein B (EC:3.4.21.116)
SpoIVB peptidase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHI4_9FIRM
L1_008_000M1_scaffold_206_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10369..11160
DNA (792bp) protein (264aa)
Putative sporulation transcription factor Spo0A n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHI3_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
sporulation transcriptional activator Spo0A
L1_008_000M1_scaffold_206_11
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11563..14841
DNA (3279bp) protein (1093aa)
Helicase-exonuclease AddAB, AddB subunit n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LA57_9FIRM
Helicase-exonuclease AddAB, AddB subunit {ECO:0000313|EMBL:EOS55251.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L1_008_000M1_scaffold_206_12
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14838..18293
DNA (3456bp) protein (1152aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD60_9FIRM
recombination helicase AddA
L1_008_000M1_scaffold_206_13
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19302..19946
DNA (645bp) protein (215aa)
Translation initiation factor IF-3 n=1 Tax=Clostridium sp. CAG:352 RepID=R6R523_9CLOT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
infC; Translation initiation factor IF-3
L1_008_000M1_scaffold_206_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19968..20165
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD57_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
rpmI; 50S ribosomal protein L35
L1_008_000M1_scaffold_206_15
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20215..20568
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LS30_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
50S ribosomal protein L20
L1_008_000M1_scaffold_206_16
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20713..21504
DNA (792bp) protein (264aa)
RNA methyltransferase TrmH family n=1 Tax=Clostridium sp. CAG:242 RepID=R6CG05_9CLOT
RNA methyltransferase TrmH family {ECO:0000313|EMBL:CDA75623.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
tRNA/rRNA methyltransferase SpoU
L1_008_000M1_scaffold_206_17
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21642..22826
DNA (1185bp) protein (395aa)
DNA protecting protein DprA n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U7W6_ETHHY
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:ADU25898.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L1_008_000M1_scaffold_206_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22873..24954
DNA (2082bp) protein (694aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I n=1 Tax=Anaerotruncus sp. G3(2012) RepID=UPI0003A64EEF
L1_008_000M1_scaffold_206_19
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24954..26270
DNA (1317bp) protein (439aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
hypothetical protein (EC:2.1.1.74)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5V0F6_9FIRM
L1_008_000M1_scaffold_206_20
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26267..27271
DNA (1005bp) protein (335aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Phosphate acyltransferase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BN11_9CLOT
plsX; Phosphate acyltransferase
L1_008_000M1_scaffold_206_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27301..27978
DNA (678bp) protein (226aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Ribonuclease 3 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T433_9FIRM
L1_008_000M1_scaffold_206_22
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(28040..28723)
DNA (684bp) protein (228aa)
4Fe-4S binding domain protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YMI0_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDD29826.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
4Fe-4S binding domain.
L1_008_000M1_scaffold_206_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28888..32463
DNA (3576bp) protein (1192aa)
Chromosome partition protein Smc n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD48_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
chromosome segregation protein SMC
L1_008_000M1_scaffold_206_24
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32473..33381
DNA (909bp) protein (303aa)
Signal recognition particle receptor FtsY n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A3E2_9CLOT
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
signal recognition particle-docking protein FtsY
L1_008_000M1_scaffold_206_25
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


33378..33974
DNA (597bp) protein (199aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CZT8_9CLOT
L1_008_000M1_scaffold_206_26
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33976..34266
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LTE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS61606.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L1_008_000M1_scaffold_206_27
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34281..34889
DNA (609bp) protein (203aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U7X9_ETHHY
L1_008_000M1_scaffold_206_28
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34886..35461
DNA (576bp) protein (192aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BPQ1_9CLOT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDA61026.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L1_008_000M1_scaffold_206_29
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35458..35817
DNA (360bp) protein (120aa)
Ribosomal silencing factor RsfS n=1 Tax=Clostridium sp. CAG:169 RepID=R6BA50_9CLOT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
iojap-like protein
L1_008_000M1_scaffold_206_30
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


35866..38271
DNA (2406bp) protein (802aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
leuS; Leucine-tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CKI1_9CLOT
Displaying items 1-30 of 73 in total

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