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L1_008_000M1_scaffold_348

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_348_1
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(386..1345)
DNA (960bp) protein (320aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZEL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12860.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L1_008_000M1_scaffold_348_2
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1503..2243)
DNA (741bp) protein (247aa)
Response regulator of the LytR/AlgR family n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W551_9FIRM
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CDD01859.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
Response regulator of the LytR/AlgR family
L1_008_000M1_scaffold_348_3
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2277..2519)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VT53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD01858.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L1_008_000M1_scaffold_348_4
unknown

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2610..2756
DNA (147bp) protein (49aa)

This feature has no annotations

L1_008_000M1_scaffold_348_5
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2685..3032)
DNA (348bp) protein (116aa)
Hpt domain protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X5W2_9FIRM
Hpt domain protein {ECO:0000313|EMBL:CDD01857.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
FOG: HPt domain
L1_008_000M1_scaffold_348_6
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3339..4745)
DNA (1407bp) protein (469aa)
S-adenosylhomocysteine deaminase (EC:3.5.4.28)
Putative hydroxydechloroatrazine ethylaminohydrolase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D0K6_9CLOT
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67646.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
L1_008_000M1_scaffold_348_7
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4769..6082)
DNA (1314bp) protein (438aa)
Xanthine/uracil permeases n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E6K6_9ACTN
Xanthine/uracil permeases
Xanthine/uracil permeases {ECO:0000313|EMBL:CBL03353.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_348_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6319..7443)
DNA (1125bp) protein (375aa)
dihydroorotate dehydrogenase family protein (EC:1.3.1.2)
4Fe-4S binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P959_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDS11928.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L1_008_000M1_scaffold_348_9
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7456..8454)
DNA (999bp) protein (333aa)
Transcriptional regulator LacI family n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AP77_9CLOT
Transcriptional regulator LacI family {ECO:0000313|EMBL:CCX42517.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
LacI family transcriptional regulator
L1_008_000M1_scaffold_348_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(8560..8754)
DNA (195bp) protein (65aa)
Transcriptional regulator MerR family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D959_9FIRM
Transcriptional regulator MerR family {ECO:0000313|EMBL:CDA81504.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L1_008_000M1_scaffold_348_11
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9191..10462)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AAQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38132.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_008_000M1_scaffold_348_12
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10480..11562)
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
leuB2; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I845_9CLOT
L1_008_000M1_scaffold_348_13
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11583..12845)
DNA (1263bp) protein (421aa)
3-isopropylmalate dehydratase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I5C9_9CLOT
3-isopropylmalate dehydratase {ECO:0000313|EMBL:ETA81450.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
3-isopropylmalate dehydratase large subunit
L1_008_000M1_scaffold_348_14
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12847..13374)
DNA (528bp) protein (176aa)
3-isopropylmalate dehydratase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I5C9_9CLOT
3-isopropylmalate dehydratase {ECO:0000313|EMBL:ETA81450.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
3-isopropylmalate dehydratase large subunit
L1_008_000M1_scaffold_348_15
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13390..14418)
DNA (1029bp) protein (343aa)
3-isopropylmalate dehydratase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I873_9CLOT
3-isopropylmalate dehydratase {ECO:0000313|EMBL:ETA81449.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
3-isopropylmalate dehydratase large subunit
L1_008_000M1_scaffold_348_16
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14709..15722
DNA (1014bp) protein (338aa)
Transcriptional regulator n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I6D9_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:ETA81448.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
transcriptional regulator
L1_008_000M1_scaffold_348_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16438..17481)
DNA (1044bp) protein (348aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHC2_9FIRM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEQ57607.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transcriptional regulator
L1_008_000M1_scaffold_348_18
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17883..19826
DNA (1944bp) protein (648aa)
Aconitate hydratase {ECO:0000313|EMBL:ETA81452.1}; EC=4.2.1.3 {ECO:0000313|EMBL:ETA81452.1};; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
aconitate hydratase/aconitase (EC:4.2.1.3)
Aconitate hydratase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I8V4_9CLOT
L1_008_000M1_scaffold_348_19
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(19945..21459)
DNA (1515bp) protein (505aa)
Phosphatase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D858_9FIRM
Phosphatase {ECO:0000313|EMBL:CDA81209.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
L1_008_000M1_scaffold_348_20
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(21462..22268)
DNA (807bp) protein (269aa)
Phosphonate ABC transporter permease PhnE n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CXC2_9FIRM
Phosphonate ABC transporter permease PhnE {ECO:0000313|EMBL:CDA81208.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
phosphonate ABC transporter permease
L1_008_000M1_scaffold_348_21
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(22283..23104)
DNA (822bp) protein (274aa)
Phosphonate ABC transporter inner membrane subunit n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DTF1_9FIRM
Phosphonate ABC transporter inner membrane subunit {ECO:0000313|EMBL:CDA81207.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
phosphonate ABC transporter permease
L1_008_000M1_scaffold_348_22
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(23101..23859)
DNA (759bp) protein (253aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Phosphonates import ATP-binding protein PhnC n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAK8_9FIRM
phosphonate ABC transporter, ATP-binding protein
L1_008_000M1_scaffold_348_23
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(24029..25075)
DNA (1047bp) protein (349aa)
Phosphonate ABC transporter periplasmic phosphonate-binding protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D0A0_9FIRM
Phosphonate ABC transporter periplasmic phosphonate-binding protein {ECO:0000313|EMBL:CDA81205.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
phosphonate ABC transporter, periplasmic phosphonate-binding protein
L1_008_000M1_scaffold_348_24
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(25230..25979)
DNA (750bp) protein (250aa)
SIS domain protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D853_9FIRM
SIS domain protein {ECO:0000313|EMBL:CDA81204.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
transcriptional regulator, RpiR family
L1_008_000M1_scaffold_348_25
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

26225..28372
DNA (2148bp) protein (716aa)
Hypothetical alcohol acetyltransferase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LX55_9FIRM
Hypothetical alcohol acetyltransferase {ECO:0000313|EMBL:CDB86746.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
elongation domain-containing protein
L1_008_000M1_scaffold_348_26
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

28395..29090
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MLQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86747.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_348_27
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29134..30072
DNA (939bp) protein (313aa)
Transcriptional regulator LysR family n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W4G6_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDD01604.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
transcriptional regulator
L1_008_000M1_scaffold_348_28
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30312..30923
DNA (612bp) protein (204aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y6I1_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
redox-sensing transcriptional repressor Rex
L1_008_000M1_scaffold_348_29
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30942..31724
DNA (783bp) protein (261aa)
Aminoglycoside phosphotransferase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7U8_9FIRM
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:CDB42524.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Phosphotransferase enzyme family.
L1_008_000M1_scaffold_348_30
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31721..31969
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FT27_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDE17756.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Displaying items 1-30 of 83 in total

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