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L1_008_000M1_scaffold_624

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_624_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

290..763
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B203_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49570.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_624_2
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

891..1703
DNA (813bp) protein (271aa)
XRE family transcriptional regulator n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FQ91_9FIRM
XRE family transcriptional regulator {ECO:0000313|EMBL:CDE17479.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
transcriptional regulator, DNA-binding protein
L1_008_000M1_scaffold_624_3
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1988..3355
DNA (1368bp) protein (456aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium sp. CAG:127 RepID=R5PHD0_9CLOT
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CCZ09346.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Uncharacterized FAD-dependent dehydrogenases
L1_008_000M1_scaffold_624_4
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(3403..4140)
DNA (738bp) protein (246aa)
Amino acid ABC transporter ATP-binding protein PAAT family (TC 3.A.1.3.-) n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6HZM6_9FIRM
Amino acid ABC transporter ATP-binding protein PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CDB43383.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
ABC transporter
L1_008_000M1_scaffold_624_5
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(4130..4867)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5II45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41838.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
polar amino acid ABC transporter inner membrane subunit
L1_008_000M1_scaffold_624_6
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(4959..5738)
DNA (780bp) protein (260aa)
ABC transporter substrate-binding protein family 3 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MNS5_9FIRM
ABC transporter substrate-binding protein family 3 {ECO:0000313|EMBL:CDB87442.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L1_008_000M1_scaffold_624_7
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6051..8213
DNA (2163bp) protein (721aa)
Tex-like protein N-terminal domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9B9_9CLOT
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:EEG31949.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Transcriptional accessory protein
L1_008_000M1_scaffold_624_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8607..8777
DNA (171bp) protein (57aa)
Ferredoxin n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDA6_9FIRM
hypothetical protein
Ferredoxin {ECO:0000313|EMBL:CDC67669.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_008_000M1_scaffold_624_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8966..9721
DNA (756bp) protein (252aa)
LIV-E family branched chain amino acid exporter AzlC n=1 Tax=Clostridium sp. CAG:7 RepID=R5INU1_9CLOT
LIV-E family branched chain amino acid exporter AzlC {ECO:0000313|EMBL:CCY43755.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
azlC; Branched-chain amino acid transport protein AzlC
L1_008_000M1_scaffold_624_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9718..10044
DNA (327bp) protein (109aa)
Branched-chain amino acid transport protein AzlD n=1 Tax=Clostridium sp. CAG:7 RepID=R5INK5_9CLOT
Branched-chain amino acid transport protein AzlD {ECO:0000313|EMBL:CCY43753.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
azlD; Branched-chain amino acid transport protein AzlD
L1_008_000M1_scaffold_624_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10096..10851)
DNA (756bp) protein (252aa)
Peptidase, M23 family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG29_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:EDS09617.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
peptidase M23
L1_008_000M1_scaffold_624_12
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11045..11458)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9L9W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS55358.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L1_008_000M1_scaffold_624_13
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11455..11802)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VP74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO62761.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
putative membrane protein
L1_008_000M1_scaffold_624_14
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(11872..12099)
DNA (228bp) protein (76aa)
Putative transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BEQ4_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:CDD64256.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_624_15
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12331..13065)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M3D4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65584.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
cyclophilin type peptidyl-prolyl cis-trans isomerase
L1_008_000M1_scaffold_624_16
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13266..13586
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CV85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79505.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
L1_008_000M1_scaffold_624_17
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14167..14598
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QUL7_ACEAZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL13818.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288).;"
L1_008_000M1_scaffold_624_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14716..15807)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61779.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000M1_scaffold_624_19
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15912..16100)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HME9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97657.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
dihydroorotate dehydrogenase family protein
L1_008_000M1_scaffold_624_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16235..17182)
DNA (948bp) protein (316aa)
Putative xanthine dehydrogenase accessory factor n=2 Tax=Oscillibacter RepID=U2QF62_9FIRM
Putative xanthine dehydrogenase accessory factor {ECO:0000313|EMBL:ERK61510.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative xanthine dehydrogenase maturation protein
L1_008_000M1_scaffold_624_21
Saccharibacillus sacchari, Saccharibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17339..17887)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Saccharibacillus kuerlensis RepID=UPI00035F0F7A
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:EXG83305.1}; TaxID=915437 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Saccharibacillus.;" source="Saccharibacillus sacchari DSM 19268.;"
Histidine phosphatase superfamily, clade-1
L1_008_000M1_scaffold_624_22
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18017..18229)
DNA (213bp) protein (71aa)
Cold-shock DNA-binding protein family n=2 Tax=Firmicutes RepID=R5ADE5_9CLOT
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:CCX39002.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
cold-shock DNA-binding protein family
L1_008_000M1_scaffold_624_23
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(18519..19232)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EQV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX90431.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L1_008_000M1_scaffold_624_24
unknown

Not on your lists

comp(19374..19559)
DNA (186bp) protein (62aa)

This feature has no annotations

L1_008_000M1_scaffold_624_25
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19552..20103)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LB57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS55950.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
NUDIX hydrolase
L1_008_000M1_scaffold_624_26
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20108..20536)
DNA (429bp) protein (143aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Putative Holliday junction resolvase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LDI3_9FIRM
Putative Holliday junction resolvase
L1_008_000M1_scaffold_624_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20856..21380
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11522.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_008_000M1_scaffold_624_28
unknown

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21387..21797
DNA (411bp) protein (137aa)

This feature has no annotations

L1_008_000M1_scaffold_624_29
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21885..23027)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZAR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25877.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000M1_scaffold_624_30
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(23043..24452)
DNA (1410bp) protein (470aa)
Alginate O-acetylation protein AlgI n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BJS1_9FIRM
Alginate O-acetylation protein AlgI {ECO:0000313|EMBL:CDA63475.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
membrane bound O-acyl transferase MBOAT family protein
Displaying items 1-30 of 45 in total

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