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L1_008_000M1_scaffold_711

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_711_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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336..1190
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GKN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26018.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_711_2
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1293..3086)
DNA (1794bp) protein (598aa)
Myosin-crossreactive antigen n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FNW0_9FIRM
Myosin-crossreactive antigen {ECO:0000313|EMBL:CDE16994.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Myosin-crossreactive antigen
L1_008_000M1_scaffold_711_3
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(3248..3820)
DNA (573bp) protein (191aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ESQ3_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCX91632.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
transcriptional regulator
L1_008_000M1_scaffold_711_4
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3984..4520
DNA (537bp) protein (179aa)
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
O-6-methylguanine DNA methyltransferase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q8V3_9FIRM
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:CDC27211.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L1_008_000M1_scaffold_711_5
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

4607..6439
DNA (1833bp) protein (611aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
Cytosine-specific methyltransferase n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CTG9_9FIRM
type II DNA modification (methyltransferase)
L1_008_000M1_scaffold_711_6
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6583..7179
DNA (597bp) protein (199aa)
Putative membrane protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YEW5_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDA19866.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
Formate/nitrite family of transporters
L1_008_000M1_scaffold_711_7
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7361..7600)
DNA (240bp) protein (80aa)
4Fe-4S binding domain protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FQW6_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDE17026.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Fe-S oxidoreductase
L1_008_000M1_scaffold_711_8
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7839..9218
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5G182_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCY06241.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
hypothetical protein
L1_008_000M1_scaffold_711_9
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(9703..10614)
DNA (912bp) protein (304aa)
LysR substrate binding domain protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I4B4_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:CDB44130.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
Transcriptional regulator
L1_008_000M1_scaffold_711_10
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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10764..12119
DNA (1356bp) protein (452aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LNZ5_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Na+-dependent transporters of the SNF family
L1_008_000M1_scaffold_711_11
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(12175..12387)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46652.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Transcriptional regulator, Cro/CI family
L1_008_000M1_scaffold_711_12
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(12402..12956)
DNA (555bp) protein (185aa)
Putative cytochrome oxidase assembly protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SIV4_9FIRM
Putative cytochrome oxidase assembly protein {ECO:0000313|EMBL:CCZ46651.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L1_008_000M1_scaffold_711_13
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13057..14427)
DNA (1371bp) protein (457aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B244_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERI65843.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
two-component sensor histidine kinase
L1_008_000M1_scaffold_711_14
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14456..15169)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002EE78A5
LytTr DNA-binding domain protein {ECO:0000313|EMBL:CDX04972.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
Response regulator of the LytR/AlgR family
L1_008_000M1_scaffold_711_15
unknown

Not on your lists

15805..16098
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDX3_9FIRM
L1_008_000M1_scaffold_711_16
unknown

Not on your lists

comp(16498..16824)
DNA (327bp) protein (109aa)

This feature has no annotations

L1_008_000M1_scaffold_711_17
unknown

Not on your lists

comp(16826..17455)
DNA (630bp) protein (210aa)
hypothetical protein
L1_008_000M1_scaffold_711_18
unknown

Not on your lists

17762..18445
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDB9_9FIRM
L1_008_000M1_scaffold_711_19
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18718..20187
DNA (1470bp) protein (490aa)
transcriptional regulator n=1 Tax=Clostridium tyrobutyricum RepID=UPI00030A6E28
Sigma-54 dependent transcription regulator {ECO:0000313|EMBL:KAJ52007.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
sigma-54 dependent transcription regulator
L1_008_000M1_scaffold_711_20
Treponema medium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

20652..22190
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Treponema medium ATCC 700293 RepID=S3JUK5_TREMD
Uncharacterized protein {ECO:0000313|EMBL:EPF28176.1}; TaxID=1125700 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema medium ATCC 700293.;"
hypothetical protein
L1_008_000M1_scaffold_711_21
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22393..23505
DNA (1113bp) protein (371aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EDO56565.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EDO56565.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Alcohol dehydrogenase, iron-dependent n=1 Tax=Clostridium sp. L2-50 RepID=A7VIQ6_9CLOT
4-hydroxybutyrate dehydrogenase
L1_008_000M1_scaffold_711_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23560..25011
DNA (1452bp) protein (484aa)
4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLH2_9FIRM
4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase {ECO:0000313|EMBL:EHO23266.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
aromatic ring hydroxylase
L1_008_000M1_scaffold_711_23
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25129..25419
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M3U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65508.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L1_008_000M1_scaffold_711_24
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25416..25682
DNA (267bp) protein (89aa)
FabA-like domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CII8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS73453.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
hypothetical protein
L1_008_000M1_scaffold_711_25
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25685..26986
DNA (1302bp) protein (434aa)
4-hydroxybutyrate coenzyme A transferase {ECO:0000313|EMBL:EJF40677.1}; EC=2.8.3.- {ECO:0000313|EMBL:EJF40677.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
4-hydroxybutyrate CoA transferase n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003762D24
acetyl-CoA hydrolase/transferase
L1_008_000M1_scaffold_711_26
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27110..28411
DNA (1302bp) protein (434aa)
Putative propionate permease n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q898H6_CLOTE
propionate permease
Putative propionate permease {ECO:0000313|EMBL:AAO35105.1}; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (strain Massachusetts / E88).;"
L1_008_000M1_scaffold_711_27
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

28431..29201
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000369B85B
Enoyl-CoA hydratase
Enoyl-CoA hydratase {ECO:0000313|EMBL:AIY89842.1}; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivorans.;"
L1_008_000M1_scaffold_711_28
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29215..30762
DNA (1548bp) protein (516aa)
Acyl CoA:acetate/3-ketoacid CoA transferase (EC:2.8.3.1)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Acetate CoA-transferase YdiF n=1 Tax=Coprococcus catus GD/7 RepID=D4J7M8_9FIRM
L1_008_000M1_scaffold_711_29
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30772..31599
DNA (828bp) protein (276aa)
4Fe-4S binding domain n=1 Tax=Clostridium sp. CAG:43 RepID=R7A6B8_9CLOT
4Fe-4S binding domain {ECO:0000313|EMBL:CDD56348.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
4Fe-4S binding domain.
L1_008_000M1_scaffold_711_30
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(31818..32570)
DNA (753bp) protein (251aa)
OmpR family two-component response regulator n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATM0_9FIRM
OmpR family two-component response regulator {ECO:0000313|EMBL:CCX46333.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
OmpR family two-component response regulator
Displaying items 1-30 of 68 in total

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