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L1_008_000M1_scaffold_1126

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1126_1
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(185..1483)
DNA (1299bp) protein (433aa)
Hemolysins and related proteins containing CBS domains n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LF06_RUMC1
Hemolysins and related proteins containing CBS domains
Hemolysins and related proteins containing CBS domains {ECO:0000313|EMBL:CBL18201.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L1_008_000M1_scaffold_1126_2
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1689..3164
DNA (1476bp) protein (492aa)
UDP-N-acetylmuramyl tripeptide synthase n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5UXN1_9FIRM
UDP-N-acetylmuramyl tripeptide synthase {ECO:0000313|EMBL:CCZ83043.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
UDP-N-acetylmuramyl tripeptide synthase
L1_008_000M1_scaffold_1126_3
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3127..3834
DNA (708bp) protein (236aa)
Predicted glutamine amidotransferase n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VR73_9FIRM
Predicted glutamine amidotransferase {ECO:0000313|EMBL:CCZ83042.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
Predicted glutamine amidotransferase
L1_008_000M1_scaffold_1126_4
unknown

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comp(3891..4184)
DNA (294bp) protein (98aa)

This feature has no annotations

L1_008_000M1_scaffold_1126_5
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4293..5012)
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MT47_9FIRM
L1_008_000M1_scaffold_1126_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5183..5782
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KD81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96496.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_008_000M1_scaffold_1126_7
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5797..6108
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LFG2_RUMC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD52959.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
L1_008_000M1_scaffold_1126_8
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6101..6532
DNA (432bp) protein (144aa)
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone SACSIN n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7A3U7_9FIRM
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone SACSIN {ECO:0000313|EMBL:CDD52960.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
L1_008_000M1_scaffold_1126_9
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6614..7498)
DNA (885bp) protein (295aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI00030F9FD6
phosphatidylserine decarboxylase
L1_008_000M1_scaffold_1126_10
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7495..8124)
DNA (630bp) protein (210aa)
Phosphatidylserine synthase (EC:2.7.8.8)
Phosphatidylserine synthase n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MLD7_9FIRM
Phosphatidylserine synthase {ECO:0000313|EMBL:CDF00572.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
L1_008_000M1_scaffold_1126_11
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8455..9243
DNA (789bp) protein (263aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
WD repeat-containing peptidylprolyl isomerase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C3789B
Uncharacterized protein {ECO:0000313|EMBL:EWM53003.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
L1_008_000M1_scaffold_1126_12
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9416..10699
DNA (1284bp) protein (428aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7AJU6_9FIRM
L1_008_000M1_scaffold_1126_13
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10853..11635
DNA (783bp) protein (261aa)
Metal-dependent hydrolases of the beta-lactamase superfamily I n=2 Tax=Ruminococcus RepID=D4LA22_RUMC1
Metal-dependent hydrolases of the beta-lactamase superfamily I
Metal-dependent hydrolases of the beta-lactamase superfamily I {ECO:0000313|EMBL:CBL16467.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L1_008_000M1_scaffold_1126_14
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11635..12111
DNA (477bp) protein (159aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MJG7_9FIRM
hypothetical protein
L1_008_000M1_scaffold_1126_15
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12287..14647
DNA (2361bp) protein (787aa)
Endoglucanase n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LA78_RUMC1
Endoglucanase
Endoglucanase {ECO:0000313|EMBL:CBL16523.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L1_008_000M1_scaffold_1126_16
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14836..17292
DNA (2457bp) protein (819aa)
cellobiose phosphorylase (EC:2.4.1.20)
Cellobiose phosphorylase n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7GTH7_9FIRM
Cellobiose phosphorylase {ECO:0000313|EMBL:CDE30694.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
L1_008_000M1_scaffold_1126_17
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17359..18150)
DNA (792bp) protein (264aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MJL3_9FIRM
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:CDF00805.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
L1_008_000M1_scaffold_1126_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18159..19556)
DNA (1398bp) protein (466aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KGB6_9FIRM
L1_008_000M1_scaffold_1126_19
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19571..20071)
DNA (501bp) protein (167aa)
HAD hydrolase, family IIB n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9K7_9CLOT
HAD hydrolase, family IIB {ECO:0000313|EMBL:EEG31772.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
putative HAD hydrolase, IIB family
L1_008_000M1_scaffold_1126_20
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20064..20717)
DNA (654bp) protein (218aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
cysE; Serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MM16_9FIRM
L1_008_000M1_scaffold_1126_21
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21184..22347)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0IZ83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT21720.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
conserved hypothetical protein
L1_008_000M1_scaffold_1126_22
unknown

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comp(22492..23190)
DNA (699bp) protein (233aa)

This feature has no annotations

L1_008_000M1_scaffold_1126_23
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23281..24225)
DNA (945bp) protein (315aa)
Glycosyltransferases involved in cell wall biogenesis (EC:3.1.26.3)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MPT3_9FIRM
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CDF01732.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
L1_008_000M1_scaffold_1126_24
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24238..25380)
DNA (1143bp) protein (381aa)
Lysophospholipase L1 and related esterases n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7ALC6_9FIRM
Lysophospholipase L1 and related esterases {ECO:0000313|EMBL:CDD54221.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
Lysophospholipase L1 and related esterases
L1_008_000M1_scaffold_1126_25
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25394..27748)
DNA (2355bp) protein (785aa)
Uncharacterized protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QTA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC39863.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
hypothetical protein
L1_008_000M1_scaffold_1126_26
Bacillus sp. X1(2014), Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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28273..28524
DNA (252bp) protein (84aa)
DNA-binding helix-turn-helix protein n=3 Tax=Lachnospiraceae RepID=C9L9G1_BLAHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIM15133.1}; TaxID=1565991 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. X1(2014).;"
L1_008_000M1_scaffold_1126_27
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28873..29118)
DNA (246bp) protein (82aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Ruminococcus RepID=D4LA51_RUMC1
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDD52549.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
L1_008_000M1_scaffold_1126_28
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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29378..30058
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7AZL0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD53977.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
L1_008_000M1_scaffold_1126_29
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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30058..31005
DNA (948bp) protein (316aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7AKM3_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CDD53976.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
L1_008_000M1_scaffold_1126_30
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30998..32374
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7A6N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD53975.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
hypothetical protein
Displaying items 1-30 of 44 in total

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