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L1_008_000M1_scaffold_1469

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1469_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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608..1018
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U476_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65597.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_008_000M1_scaffold_1469_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1031..1327
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KZB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ97450.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_008_000M1_scaffold_1469_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1393..2655
DNA (1263bp) protein (421aa)
dcm2; DNA (cytosine-5-)-methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417, ECO:0000313|EMBL:CCO06358.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Cytosine-specific methyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T789_9FIRM
L1_008_000M1_scaffold_1469_4

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2624..3166
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SZA3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC60714.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_1469_5
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3163..3672
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UFJ9_RUMA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU21903.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L1_008_000M1_scaffold_1469_6
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4056..4610)
DNA (555bp) protein (185aa)
Putative toxin-antitoxin system toxin component n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FBB0_9FIRM
Putative toxin-antitoxin system toxin component {ECO:0000313|EMBL:CDE12135.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
hypothetical protein predicted by Glimmer/Critica
L1_008_000M1_scaffold_1469_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4658..5110)
DNA (453bp) protein (151aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KYY5_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERJ97330.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
helix-turn-helix domain-containing protein
L1_008_000M1_scaffold_1469_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5291..5950
DNA (660bp) protein (220aa)
BRO family, N-terminal domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6Y9_9FIRM
BRO family, N-terminal domain protein {ECO:0000313|EMBL:EDS12964.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
prophage antirepressor
L1_008_000M1_scaffold_1469_9
unknown

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5956..6126
DNA (171bp) protein (57aa)

This feature has no annotations

L1_008_000M1_scaffold_1469_10
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6207..6416
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K0K4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR73007.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
helix-turn-helix domain-containing protein
L1_008_000M1_scaffold_1469_11
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6416..6670
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FI74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE13387.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
L1_008_000M1_scaffold_1469_12
unknown

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6735..6926
DNA (192bp) protein (64aa)

This feature has no annotations

L1_008_000M1_scaffold_1469_13
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6993..8984
DNA (1992bp) protein (664aa)
Integrase core domain protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FEX2_9FIRM
Integrase core domain protein {ECO:0000313|EMBL:CDE13390.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
A; MU-like transposase
L1_008_000M1_scaffold_1469_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8987..9919
DNA (933bp) protein (311aa)
AAA domain protein n=2 Tax=Ruminococcus RepID=R7FFF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94740.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
B; DNA transposition protein
L1_008_000M1_scaffold_1469_15
unknown

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10054..10398
DNA (345bp) protein (115aa)

This feature has no annotations

L1_008_000M1_scaffold_1469_16
unknown

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10400..10672
DNA (273bp) protein (91aa)

This feature has no annotations

L1_008_000M1_scaffold_1469_17
unknown

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10669..10863
DNA (195bp) protein (65aa)

This feature has no annotations

L1_008_000M1_scaffold_1469_18
unknown

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10968..11204
DNA (237bp) protein (79aa)

This feature has no annotations

L1_008_000M1_scaffold_1469_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11204..11854
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6UCG1_9CLOT
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06305.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_008_000M1_scaffold_1469_20
unknown

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comp(11893..12057)
DNA (165bp) protein (55aa)

This feature has no annotations

L1_008_000M1_scaffold_1469_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12109..12858
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TNZ9_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:AIY82201.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L1_008_000M1_scaffold_1469_22
unknown

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12872..13264
DNA (393bp) protein (131aa)

This feature has no annotations

L1_008_000M1_scaffold_1469_23
unknown

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13257..13433
DNA (177bp) protein (59aa)

This feature has no annotations

L1_008_000M1_scaffold_1469_24

Not on your lists

13441..13728
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5N8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKK69374.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_1469_25
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13673..14437
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FFF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE13396.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
hypothetical protein
L1_008_000M1_scaffold_1469_26
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

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14451..14933
DNA (483bp) protein (161aa)
PF06252 family protein n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J6H7H7_9FIRM
PF06252 family protein {ECO:0000313|EMBL:EJU21170.1}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
hypothetical phage protein
L1_008_000M1_scaffold_1469_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14930..15238
DNA (309bp) protein (103aa)
Mor transcription activator family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6Z8_9FIRM
Mor transcription activator family protein {ECO:0000313|EMBL:EDS12973.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Mor transcription activator family.
L1_008_000M1_scaffold_1469_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15346..15642
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:379 RepID=R6ZXV2_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06302.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_008_000M1_scaffold_1469_29
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15639..15971
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7B0B7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD53357.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
L1_008_000M1_scaffold_1469_30
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15983..16531
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7AIX6_9FIRM
Protein of unknown function (DUF3486).
Uncharacterized protein {ECO:0000313|EMBL:CDD53356.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
Displaying items 1-30 of 48 in total

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