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L1_008_000M1_scaffold_496

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_496_1
unknown

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194..352
DNA (159bp) protein (53aa)

This feature has no annotations

L1_008_000M1_scaffold_496_2
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(328..1509)
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X129_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03301.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
capsule biosynthesis protein
L1_008_000M1_scaffold_496_3
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1521..3065)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KVA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB75074.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
Na+-driven multidrug efflux pump
L1_008_000M1_scaffold_496_4
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3073..4311)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KIU5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB75073.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
hypothetical protein
L1_008_000M1_scaffold_496_5
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4340..5407)
DNA (1068bp) protein (356aa)
polysaccharide biosynthesis protein n=1 Tax=Sporolactobacillus vineae RepID=UPI00028A3CC3
family 2 glycosyl transferase
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:CEG28637.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
L1_008_000M1_scaffold_496_6
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5431..6393)
DNA (963bp) protein (321aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EER68417.1}; EC=2.4.-.- {ECO:0000313|EMBL:EER68417.1};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
epsJ2; putative glycosyltransferase EpsJ (EC:2.4.-.-)
Glycosyltransferase, group 2 family protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWF7_9BACL
L1_008_000M1_scaffold_496_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6394..7419)
DNA (1026bp) protein (342aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Sugar kinases, ribokinase family {ECO:0000313|EMBL:CBK90025.1}; EC=2.7.1.45 {ECO:0000313|EMBL:CBK90025.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Sugar kinases, ribokinase family n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3N5_9FIRM
L1_008_000M1_scaffold_496_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7433..7933)
DNA (501bp) protein (167aa)
Isopropylmalate/homocitrate/citramalate synthases (EC:4.1.3.39)
Isopropylmalate/homocitrate/citramalate synthases {ECO:0000313|EMBL:CBK90024.1}; EC=4.1.3.39 {ECO:0000313|EMBL:CBK90024.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Isopropylmalate/homocitrate/citramalate synthases n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3N4_9FIRM
L1_008_000M1_scaffold_496_9
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(7911..9008)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium EnGen0054 RepID=L2RKG4_ENTFC
hypothetical protein
HMGL-like protein {ECO:0000313|EMBL:EJX40571.1}; TaxID=1134839 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium R501.;"
L1_008_000M1_scaffold_496_10
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9025..9678)
DNA (654bp) protein (218aa)
CMP-N-acetylneuraminic acid synthetase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RFF8_9FIRM
CMP-N-acetylneuraminic acid synthetase {ECO:0000313|EMBL:CDC33227.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
CMP-N-acetylneuraminic acid synthetase
L1_008_000M1_scaffold_496_11
WS6_GWD2_36_26, WS6, Bacteria

Not on your lists

comp(9703..10593)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00037EF4E3
Uncharacterized protein {ECO:0000313|EMBL:KKQ04739.1}; TaxID=1619102 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_WS6_36_26.;"
hypothetical protein
L1_008_000M1_scaffold_496_12
Streptococcus pseudoporcinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10605..11102)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Streptococcus parauberis KRS-02109 RepID=M5PJF5_9STRE
WxcM-like protein {ECO:0000313|EMBL:EHI65522.1}; TaxID=875093 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pseudoporcinus LQ 940-04.;"
GNAT family acetyltransferase
L1_008_000M1_scaffold_496_13
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11123..12220)
DNA (1098bp) protein (366aa)
DegT/DnrJ/EryC1/StrS family aminotransferase (EC:2.6.1.-)
Aminotransferase DegT/DnrJ/EryC1/StrS family {ECO:0000313|EMBL:ADL33101.1}; EC=2.6.1.- {ECO:0000313|EMBL:ADL33101.1};; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
Aminotransferase DegT/DnrJ/EryC1/StrS family n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0RYM0_BUTPB
L1_008_000M1_scaffold_496_14
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12220..12630)
DNA (411bp) protein (137aa)
WxcM-like protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P232_9FIRM
WxcM-like protein {ECO:0000313|EMBL:CCZ03721.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
WxcM-like protein
L1_008_000M1_scaffold_496_15
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12617..13522)
DNA (906bp) protein (302aa)
Glycosyltransferase group 2 family protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NIW4_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCZ03723.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
glycosyl transferase family 2
L1_008_000M1_scaffold_496_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13547..14866)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7M1_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24080.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_008_000M1_scaffold_496_17
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14918..15805)
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HG35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99679.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L1_008_000M1_scaffold_496_18
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15810..16988)
DNA (1179bp) protein (393aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HG36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99680.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Coenzyme F420-reducing hydrogenase, beta subunit
L1_008_000M1_scaffold_496_19
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17014..18108)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HG37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99681.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Polysaccharide pyruvyl transferase.
L1_008_000M1_scaffold_496_20
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18187..19368)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GQC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29280.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
glycosyl transferase
L1_008_000M1_scaffold_496_21
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19386..20549)
DNA (1164bp) protein (388aa)
Glycosyltransferase n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4L9T0_RUMC1
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBL16375.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L1_008_000M1_scaffold_496_22
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20573..21181)
DNA (609bp) protein (203aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3 5-epimerase n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MQP2_9FIRM
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CDF02970.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
L1_008_000M1_scaffold_496_23
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21185..22042)
DNA (858bp) protein (286aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CBL16377.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CBL16377.1};; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4L9T2_RUMC1
L1_008_000M1_scaffold_496_24
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22042..23070)
DNA (1029bp) protein (343aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CBL16379.1}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CBL16379.1};; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4L9T4_RUMC1
L1_008_000M1_scaffold_496_25
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23376..24272)
DNA (897bp) protein (299aa)
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBL16380.1}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBL16380.1};; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4L9T5_RUMC1
L1_008_000M1_scaffold_496_26
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24560..25852)
DNA (1293bp) protein (431aa)
Peptidoglycan-binding LysM n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRF0_CLOPH
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:ABX42024.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_008_000M1_scaffold_496_27
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26266..28719)
DNA (2454bp) protein (818aa)
Glycosyl hydrolase family 9 n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VSS5_9FIRM
Glycosyl hydrolase family 9 {ECO:0000313|EMBL:CCZ83582.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
Cellulose binding domain-containing protein,dockerin-like protein
L1_008_000M1_scaffold_496_28
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29029..30591
DNA (1563bp) protein (521aa)
Glycoside hydrolase family 5 n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FBL5_9FIRM
Glycoside hydrolase family 5 {ECO:0000313|EMBL:CDE11858.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
glycoside hydrolase family protein
L1_008_000M1_scaffold_496_29
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30692..31063
DNA (372bp) protein (124aa)
UPF0251 protein Desmer_1222 n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IVS5_DESMD
UPF0251 protein JT05_03285 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
DNA-binding protein
L1_008_000M1_scaffold_496_30
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31064..31471
DNA (408bp) protein (136aa)
Uncharacterized conserved protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTK5_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL41147.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Displaying items 1-30 of 104 in total

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