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L1_008_000M1_scaffold_3813

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3813_1
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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62..913
DNA (852bp) protein (284aa)
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QHQ4_9FIRM
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC30436.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_3813_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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913..1779
DNA (867bp) protein (289aa)
ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSH9_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFB74359.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_3813_3
unknown

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comp(1836..2015)
DNA (180bp) protein (60aa)

This feature has no annotations

L1_008_000M1_scaffold_3813_4
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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2204..3208
DNA (1005bp) protein (335aa)
Transcriptional regulator AraC family n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HSP5_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCY27842.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
transcriptional regulator, AraC family
L1_008_000M1_scaffold_3813_5
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3297..5180)
DNA (1884bp) protein (628aa)
Cadmium-exporting ATPase {ECO:0000313|EMBL:EDP11810.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EDP11810.1};; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Cadmium-exporting ATPase n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RB29_9FIRM
L1_008_000M1_scaffold_3813_6
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5275..5496)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EBP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97963.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Cation transport ATPase
L1_008_000M1_scaffold_3813_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5675..6001
DNA (327bp) protein (109aa)
Transcriptional regulator, ArsR family n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQD3_9FIRM
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EDY32580.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
transcriptional regulator, ArsR family
L1_008_000M1_scaffold_3813_8
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6176..7318)
DNA (1143bp) protein (381aa)
Threonine/alanine tRNA ligase second additional domain protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NIY2_9CLOT
Threonine/alanine tRNA ligase second additional domain protein {ECO:0000313|EMBL:CDC11140.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Alanyl-tRNA synthetase
L1_008_000M1_scaffold_3813_9
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7530..8153
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IT89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE54553.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
hypothetical protein
L1_008_000M1_scaffold_3813_10
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8153..9448
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QWU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF42133.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
patatin family phospholipase
Displaying 10 items

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