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L1_008_000M1_scaffold_1000

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1000_1
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(186..734)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6XDB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD04342.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
acetyltransferase family protein
L1_008_000M1_scaffold_1000_2
unknown

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comp(752..2245)
DNA (1494bp) protein (498aa)

This feature has no annotations

L1_008_000M1_scaffold_1000_3
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2273..3793)
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B73116
CPS16P {ECO:0000313|EMBL:CDA91628.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
cps16P; glucosyltransferase
L1_008_000M1_scaffold_1000_4
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4130..7609
DNA (3480bp) protein (1160aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Clostridium sp. CAG:138 RepID=R6AQZ6_9CLOT
pyruvate:ferredoxin (flavodoxin) oxidoreductase
L1_008_000M1_scaffold_1000_5
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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7871..9370
DNA (1500bp) protein (500aa)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G805_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CBN58745.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
Rhs element Vgr family protein
L1_008_000M1_scaffold_1000_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9500..13006)
DNA (3507bp) protein (1169aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IAN3_9FIRM
L1_008_000M1_scaffold_1000_7
unknown

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comp(13022..13585)
DNA (564bp) protein (188aa)

This feature has no annotations

L1_008_000M1_scaffold_1000_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13812..15857)
DNA (2046bp) protein (682aa)
Flavocytochrome c n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV65_9FIRM
Flavocytochrome c {ECO:0000313|EMBL:EDN00266.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
flavocytochrome c
L1_008_000M1_scaffold_1000_9
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16054..17541
DNA (1488bp) protein (496aa)
DNA replication protein DnaD n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ICI9_9FIRM
DNA replication protein DnaD {ECO:0000313|EMBL:CDE48207.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
primosome subunit DnaD
L1_008_000M1_scaffold_1000_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17538..18533
DNA (996bp) protein (332aa)
IstB domain protein ATP-binding protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9D3_9FIRM
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:CDE48205.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
ATPase AAA
L1_008_000M1_scaffold_1000_11
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18890..19471
DNA (582bp) protein (194aa)
AAA ATPase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N7I0_9CLOT
AAA ATPase
AAA ATPase {ECO:0000313|EMBL:AGF59327.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_008_000M1_scaffold_1000_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19711..22407)
DNA (2697bp) protein (899aa)
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein 1A family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IBI6_9FIRM
Penicillin-binding protein 1A family {ECO:0000313|EMBL:CDE48955.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L1_008_000M1_scaffold_1000_13
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22554..23237
DNA (684bp) protein (228aa)
Sporulation protein YunB n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IAN1_9FIRM
Sporulation protein YunB {ECO:0000313|EMBL:CDE48954.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
sporulation protein YunB
L1_008_000M1_scaffold_1000_14
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23299..24003
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ICD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48953.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L1_008_000M1_scaffold_1000_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24195..24983
DNA (789bp) protein (263aa)
Sporulation transcriptional activator Spo0A n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IK23_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
spo0A; stage 0 sporulation protein A
L1_008_000M1_scaffold_1000_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25145..26131
DNA (987bp) protein (329aa)
Phage integrase SAM-like domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NS93_9FIRM
Phage integrase SAM-like domain protein {ECO:0000313|EMBL:EDN01131.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
DNA integration/recombination protein
L1_008_000M1_scaffold_1000_17
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

26567..27007
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y183_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15749.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L1_008_000M1_scaffold_1000_18
unknown

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27022..27477
DNA (456bp) protein (152aa)

This feature has no annotations

L1_008_000M1_scaffold_1000_19
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27569..27796)
DNA (228bp) protein (76aa)
Putative restriction-modification system control element Bcll n=1 Tax=Ruminococcus albus 8 RepID=E9SHR5_RUMAL
Putative restriction-modification system control element Bcll {ECO:0000313|EMBL:EGC01146.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
helix-turn-helix domain-containing protein
L1_008_000M1_scaffold_1000_20
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28163..29062
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G0X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17955.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L1_008_000M1_scaffold_1000_21
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29133..29720)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M8U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64267.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Resolvase domain
L1_008_000M1_scaffold_1000_22
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30084..30293
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI0003730804
Uncharacterized protein {ECO:0000313|EMBL:KJJ70409.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_008_000M1_scaffold_1000_23
unknown

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comp(30415..30702)
DNA (288bp) protein (96aa)

This feature has no annotations

Displaying 23 items

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