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L1_008_000M1_scaffold_1144

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1144_1
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..288)
DNA (288bp) protein (96aa)
ABC transporter permease n=1 Tax=Paenibacillus fonticola RepID=UPI00037C923A
ABC transporter permease {ECO:0000313|EMBL:KIL41317.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
ABC transporter permease
L1_008_000M1_scaffold_1144_2
Caldicellulosiruptor owensensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(288..977)
DNA (690bp) protein (230aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=632518 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL).;"
ABC transporter, ATP-binding protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LFN1_9FIRM
ABC transporter-like protein
L1_008_000M1_scaffold_1144_3
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(991..2925)
DNA (1935bp) protein (645aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LFN2_9FIRM
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EET60617.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
macA; MacA protein
L1_008_000M1_scaffold_1144_4
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3086..3802)
DNA (717bp) protein (239aa)
Metallophosphoesterase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7W6_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:CDE47954.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
metallophosphoesterase
L1_008_000M1_scaffold_1144_5
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3824..4225)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9I5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE47953.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L1_008_000M1_scaffold_1144_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4365..4877
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IBR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE47952.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L1_008_000M1_scaffold_1144_7
unknown

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comp(4850..5038)
DNA (189bp) protein (63aa)

This feature has no annotations

L1_008_000M1_scaffold_1144_8
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5151..6158)
DNA (1008bp) protein (336aa)
DNA polymerase III n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIX3_9FIRM
DNA polymerase III {ECO:0000313|EMBL:CDE51719.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
DNA polymerase III subunit delta
L1_008_000M1_scaffold_1144_9
unknown

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comp(6136..7656)
DNA (1521bp) protein (507aa)

This feature has no annotations

L1_008_000M1_scaffold_1144_10
unknown

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comp(7670..8665)
DNA (996bp) protein (332aa)

This feature has no annotations

L1_008_000M1_scaffold_1144_11
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8681..10051)
DNA (1371bp) protein (457aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFC0_9FIRM
integral membrane sensor signal transduction histidine kinase
L1_008_000M1_scaffold_1144_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10137..10832)
DNA (696bp) protein (232aa)
Two component transcriptional regulator winged helix family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IEH7_9FIRM
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CDE50035.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
winged helix family two component transcriptional regulator
L1_008_000M1_scaffold_1144_13

Not on your lists

11061..12530
DNA (1470bp) protein (490aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJH5_9FIRM
Peptidase s11 d-alanyl-d-alanine carboxypeptidase 1 {ECO:0000313|EMBL:AHF25239.1}; TaxID=1393628 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig90.;"
L1_008_000M1_scaffold_1144_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12992..13663)
DNA (672bp) protein (224aa)
Acyltransferase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAZ5_9FIRM
Acyltransferase {ECO:0000313|EMBL:EDP21696.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_1144_15
GWA2_OP11_43_10, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(14127..15818)
DNA (1692bp) protein (564aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS79615.1}; TaxID=1618369 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWA2_43_10.;"
L1_008_000M1_scaffold_1144_16
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15826..17562)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6DPR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA86336.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
hypothetical protein
L1_008_000M1_scaffold_1144_17
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17646..17996)
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5M8_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
rplT; 50S ribosomal protein L20
L1_008_000M1_scaffold_1144_18
Thermoanaerobacterium aotearoense, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18022..18219)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VXF8_THESW
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1421016 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium aotearoense SCUT27.;"
L1_008_000M1_scaffold_1144_19
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18245..18820)
DNA (576bp) protein (192aa)
Translation initiation factor IF-3 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7B7_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
translation initiation factor IF-3
L1_008_000M1_scaffold_1144_20
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18965..20182)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AQW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX41541.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
acyltransferase 3
L1_008_000M1_scaffold_1144_21
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20193..20573)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JSR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC53949.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L1_008_000M1_scaffold_1144_22
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20584..23334)
DNA (2751bp) protein (917aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I3I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46464.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L1_008_000M1_scaffold_1144_23
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23363..24073)
DNA (711bp) protein (237aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Pseudouridine synthase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8K1_9FIRM
pseudouridine synthase
L1_008_000M1_scaffold_1144_24
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24160..25278)
DNA (1119bp) protein (373aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:AEE96156.1}; EC=3.4.16.4 {ECO:0000313|EMBL:AEE96156.1};; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A2A9_MAHA5
L1_008_000M1_scaffold_1144_25
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25275..26369)
DNA (1095bp) protein (365aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDS12680.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDS12680.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P827_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L1_008_000M1_scaffold_1144_26
unknown

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comp(26905..27279)
DNA (375bp) protein (125aa)

This feature has no annotations

L1_008_000M1_scaffold_1144_27
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27365..27856)
DNA (492bp) protein (164aa)
Kynurenine formamidase {ECO:0000313|EMBL:KJJ68283.1}; EC=3.5.1.9 {ECO:0000313|EMBL:KJJ68283.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNH0_9CLOT
hypothetical protein
Displaying 27 items

View Taxonomy