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L1_008_000M1_scaffold_1220

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1220_1
unknown

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2..382
DNA (381bp) protein (127aa)

This feature has no annotations

L1_008_000M1_scaffold_1220_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1102..2475)
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Clostridium sp. D5 RepID=F0YY95_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EGB93197.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_1220_3
unknown

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comp(2645..2776)
DNA (132bp) protein (44aa)

This feature has no annotations

L1_008_000M1_scaffold_1220_4
unknown

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comp(2817..3242)
DNA (426bp) protein (142aa)

This feature has no annotations

L1_008_000M1_scaffold_1220_5
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3400..4029
DNA (630bp) protein (210aa)
SOS-response transcriptional repressors (RecA-mediated autopeptidases) n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H745_9FIRM
SOS-response transcriptional repressors (RecA-mediated autopeptidases) {ECO:0000313|EMBL:CDE34027.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
SOS-response transcriptional repressors (RecA-mediated autopeptidases)
L1_008_000M1_scaffold_1220_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4190..4651
DNA (462bp) protein (154aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V5L3_CLOPF
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDT22192.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L1_008_000M1_scaffold_1220_7
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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comp(4729..5883)
DNA (1155bp) protein (385aa)
Putative uncharacterized protein id=4592754 bin=GWF2_Firmicute_57_13 species=Pyramidobacter piscolens genus=Pyramidobacter taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=GWF2_Tenericutes_57_13_curated
L1_008_000M1_scaffold_1220_8
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6121..7032)
DNA (912bp) protein (304aa)
Membrane dipeptidase (EC:3.4.13.19)
Membrane dipeptidase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IBC5_9FIRM
Membrane dipeptidase {ECO:0000313|EMBL:CDE48613.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L1_008_000M1_scaffold_1220_9
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7175..9607)
DNA (2433bp) protein (811aa)
cellobiose phosphorylase (EC:2.4.1.20)
Cellobiose phosphorylase Cbp94A n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6S0I0_9FIRM
Cellobiose phosphorylase Cbp94A {ECO:0000313|EMBL:CDC40117.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
L1_008_000M1_scaffold_1220_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10013..11026
DNA (1014bp) protein (338aa)
Periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ICJ7_9FIRM
Periplasmic binding protein and sugar binding domain of the LacI family protein {ECO:0000313|EMBL:CDE49023.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
LacI family transcriptional regulator
L1_008_000M1_scaffold_1220_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11083..12444
DNA (1362bp) protein (454aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ06_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFQ06848.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_1220_12
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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12637..13566
DNA (930bp) protein (310aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9T9_9FIRM
ABC transporter permease {ECO:0000313|EMBL:KJF40828.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_1220_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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13563..14441
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RX65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66242.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_1220_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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14553..15908
DNA (1356bp) protein (452aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Beta-galactosidase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AAZ8_9CLOT
beta-galactosidase
L1_008_000M1_scaffold_1220_15
unknown

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comp(16033..17064)
DNA (1032bp) protein (344aa)

This feature has no annotations

L1_008_000M1_scaffold_1220_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17133..18449)
DNA (1317bp) protein (439aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWR4_9FIRM
histidine kinase
L1_008_000M1_scaffold_1220_17
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18446..19114)
DNA (669bp) protein (223aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2D0H9_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:ERI73041.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
two component transcriptional regulator, HTH-type
L1_008_000M1_scaffold_1220_18
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(19339..20715)
DNA (1377bp) protein (459aa)
DNA repair protein radA n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEJ2_RHOM4
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
DNA repair protein RadA
L1_008_000M1_scaffold_1220_19

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20978..22102
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) RepID=F4PFK2_BATDJ
Phosphoesterase {ECO:0000313|EMBL:AHF25417.1}; TaxID=1393376 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig11.;"
hypothetical protein
L1_008_000M1_scaffold_1220_20
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22408..24024)
DNA (1617bp) protein (539aa)
ABC transporter related n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJ98_CLOPH
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABX42510.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_008_000M1_scaffold_1220_21
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24025..25887)
DNA (1863bp) protein (621aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJ97_CLOPH
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABX42509.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_008_000M1_scaffold_1220_22
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25922..26590)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJ96_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX42508.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Displaying 22 items

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