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L1_008_000M1_scaffold_1225

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1225_1
Brachyspira intermedia, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

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comp(245..1417)
DNA (1173bp) protein (391aa)
Major facilitator superfamily MFS 1 n=1 Tax=Brachyspira intermedia (strain ATCC 51140 / PWS/A) RepID=G0EL52_BRAIP
major facilitator superfamily MFS 1
Major facilitator superfamily MFS 1 {ECO:0000313|EMBL:AEM22708.1}; TaxID=1045858 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira intermedia (strain ATCC 51140 / PWS/A) (Serpulina; intermedia).;"
L1_008_000M1_scaffold_1225_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(1504..1830)
DNA (327bp) protein (109aa)
Acetyltransferase GNAT family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IU62_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCY40342.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ribosomal protein N-acetylase
L1_008_000M1_scaffold_1225_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1903..2100)
DNA (198bp) protein (66aa)
50S ribosomal protein L32 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7Q3_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
rpmF; 50S ribosomal protein L32
L1_008_000M1_scaffold_1225_4
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2104..2628)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AGF0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42375.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L1_008_000M1_scaffold_1225_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2738..3934)
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YU33_9CLOT
L1_008_000M1_scaffold_1225_6
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4028..5026)
DNA (999bp) protein (333aa)
Phosphotransacetylase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ANV7_9CLOT
Phosphotransacetylase {ECO:0000313|EMBL:CCX42462.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
phosphate acetyltransferase
L1_008_000M1_scaffold_1225_7
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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5222..6409
DNA (1188bp) protein (396aa)
UPF0348 protein BN453_01760 n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AG42_9FIRM
UPF0348 protein BN453_01760 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
L1_008_000M1_scaffold_1225_8
unknown

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6453..7217
DNA (765bp) protein (255aa)

This feature has no annotations

L1_008_000M1_scaffold_1225_9
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7222..7431)
DNA (210bp) protein (70aa)
Predicted transcriptional regulators n=1 Tax=Coprococcus catus GD/7 RepID=D4J5N5_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK79656.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_008_000M1_scaffold_1225_10
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(7434..7841)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ERV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX91342.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L1_008_000M1_scaffold_1225_11
Treponema sp. JC4, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(8023..11013)
DNA (2991bp) protein (997aa)
Putative Zn-dependent peptidase n=1 Tax=Treponema sp. JC4 RepID=I0XAV0_9SPIO
Putative Zn-dependent peptidase {ECO:0000313|EMBL:EID85766.1}; TaxID=1124982 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema sp. JC4.;"
peptidase M16 domain-containing protein
L1_008_000M1_scaffold_1225_12
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11057..12613)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NWG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02052.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L1_008_000M1_scaffold_1225_13
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12625..14127)
DNA (1503bp) protein (501aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7W8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15713.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_008_000M1_scaffold_1225_14
unknown

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comp(14141..15652)
DNA (1512bp) protein (504aa)

This feature has no annotations

L1_008_000M1_scaffold_1225_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15786..16754)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5E6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46483.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L1_008_000M1_scaffold_1225_16
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16822..18126)
DNA (1305bp) protein (435aa)
Bacterial capsule synthesis protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7N2_9FIRM
Bacterial capsule synthesis protein {ECO:0000313|EMBL:EDR45686.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
capsule synthesis protein CapA
L1_008_000M1_scaffold_1225_17
unknown

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18223..18474
DNA (252bp) protein (84aa)

This feature has no annotations

L1_008_000M1_scaffold_1225_18
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18411..20678)
DNA (2268bp) protein (756aa)
DEAD_2 domain protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IAK4_9FIRM
DEAD_2 domain protein {ECO:0000313|EMBL:CDE48929.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
ATP-dependent helicase
L1_008_000M1_scaffold_1225_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20675..22963)
DNA (2289bp) protein (763aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76975.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_008_000M1_scaffold_1225_20
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(23088..26438)
DNA (3351bp) protein (1117aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D5E7_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH37652.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6).;"
Displaying 20 items

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