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L1_008_000M1_scaffold_1274

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1274_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..79)
-----------------
DNA (78bp)
protein (26aa)
Peptidase E {ECO:0000313|EMBL:CBL24794.1}; EC=3.4.13.21 {ECO:0000313|EMBL:CBL24794.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Peptidase E n=2 Tax=root RepID=D4K3A2_9FIRM
dipeptidase E
L1_008_000M1_scaffold_1274_2
unknown

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comp(674..1504)
-----------------
DNA (831bp)
protein (277aa)

This feature has no annotations

L1_008_000M1_scaffold_1274_3
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2199..2747
-----------------
DNA (549bp)
protein (183aa)
TRAP transporter, DctM subunit n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LTZ7_9FIRM
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EOS59197.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
TRAP transporter, DctM subunit
L1_008_000M1_scaffold_1274_4
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2847..3932
-----------------
DNA (1086bp)
protein (362aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L969_9FIRM
L1_008_000M1_scaffold_1274_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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3937..5547
-----------------
DNA (1611bp)
protein (537aa)
mannitol 2-dehydrogenase (EC:1.1.1.67)
Mannitol dehydrogenase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RKA3_9FIRM
Mannitol dehydrogenase {ECO:0000313|EMBL:CDC48170.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_008_000M1_scaffold_1274_6
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5553..6236
-----------------
DNA (684bp)
protein (228aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RAD9_CLOSW
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADL04217.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_008_000M1_scaffold_1274_7
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

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6369..7523
-----------------
DNA (1155bp)
protein (385aa)
Penicillin-binding protein 4 n=1 Tax=Bacteroidales bacterium CF RepID=U5Q2C4_9BACT
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
L1_008_000M1_scaffold_1274_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7671..8432
-----------------
DNA (762bp)
protein (254aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67508.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
short chain dehydrogenase/reductase
L1_008_000M1_scaffold_1274_9
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8627..10057
-----------------
DNA (1431bp)
protein (477aa)
Transporter CPA2 family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HUS2_9FIRM
Transporter CPA2 family {ECO:0000313|EMBL:CDB41623.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
putative Na(+)/H(+) antiporterprotein
L1_008_000M1_scaffold_1274_10
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10054..10767
-----------------
DNA (714bp)
protein (238aa)
Uncharacterized membrane protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FXZ2_9FIRM
Uncharacterized membrane protein {ECO:0000313|EMBL:CDE18592.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Uncharacterized membrane protein
L1_008_000M1_scaffold_1274_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11016..11651)
-----------------
DNA (636bp)
protein (212aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RUS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQN60307.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Uncharacterized BCR, YitT family COG1284.
L1_008_000M1_scaffold_1274_12
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11941..13179
-----------------
DNA (1239bp)
protein (413aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase putative n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UQ97_9FIRM
Xaa-Pro aminopeptidase putative {ECO:0000313|EMBL:CDC72957.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_008_000M1_scaffold_1274_13
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13198..14088
-----------------
DNA (891bp)
protein (297aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IMJ5_9FIRM
L1_008_000M1_scaffold_1274_14
unknown

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14157..14333
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

L1_008_000M1_scaffold_1274_15
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14324..15007
-----------------
DNA (684bp)
protein (228aa)
Spore cortex-lytic enzyme n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FGX4_9FIRM
Spore cortex-lytic enzyme {ECO:0000313|EMBL:CCY04295.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
sleB3; spore cortex-lytic enzyme SleB
L1_008_000M1_scaffold_1274_16
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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15019..16281
-----------------
DNA (1263bp)
protein (421aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R774_THETN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM25674.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
L1_008_000M1_scaffold_1274_17
unknown

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comp(16318..16767)
-----------------
DNA (450bp)
protein (150aa)

This feature has no annotations

L1_008_000M1_scaffold_1274_18
Listeria cornellensis, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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17089..18390
-----------------
DNA (1302bp)
protein (434aa)
wzx; flippase (EC:3.6.3.1)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037421F2
Flippase {ECO:0000313|EMBL:EUJ31545.1}; TaxID=1265820 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria cornellensis FSL F6-969.;"
L1_008_000M1_scaffold_1274_19
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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18481..19998
-----------------
DNA (1518bp)
protein (506aa)
Stage V sporulation protein K domain protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y9F4_9FIRM
Stage V sporulation protein K domain protein {ECO:0000313|EMBL:ESL04737.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
spoVK; putative stage V sporulation protein K
L1_008_000M1_scaffold_1274_20
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20002..21795
-----------------
DNA (1794bp)
protein (598aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDR6_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG30264.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_008_000M1_scaffold_1274_21
unknown

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21867..22463
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

L1_008_000M1_scaffold_1274_22
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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23045..23566
-----------------
DNA (522bp)
protein (174aa)
Ribonuclease {ECO:0000313|EMBL:EEF69746.1}; EC=3.1.27.- {ECO:0000313|EMBL:EEF69746.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Ribonuclease n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2Q4_9FIRM
S-layer protein
L1_008_000M1_scaffold_1274_23
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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23572..23835
-----------------
DNA (264bp)
protein (88aa)
Barstar (Barnase inhibitor) n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LEH3_9FIRM
Barstar (Barnase inhibitor) {ECO:0000313|EMBL:EFY04773.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
hypothetical protein
L1_008_000M1_scaffold_1274_24
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23899..24972)
-----------------
DNA (1074bp)
protein (358aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PK51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB88117.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
apbE_2; thiamine biosynthesis lipoprotein apbE
L1_008_000M1_scaffold_1274_25
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25172..25750
-----------------
DNA (579bp)
protein (193aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4L6_9FIRM
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:CDE46198.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
Displaying 25 items

View Taxonomy