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L1_008_000M1_scaffold_1285

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1285_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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764..2221
-----------------
DNA (1458bp)
protein (486aa)
Arylsulfatase {ECO:0000313|EMBL:EDY32977.1}; EC=3.1.6.- {ECO:0000313|EMBL:EDY32977.1};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Arylsulfatase n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CP71_9FIRM
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L1_008_000M1_scaffold_1285_2
unknown

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comp(2307..3380)
-----------------
DNA (1074bp)
protein (358aa)

This feature has no annotations

L1_008_000M1_scaffold_1285_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3671..4078)
-----------------
DNA (408bp)
protein (136aa)
Mutator mutT protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTS8_9CLOT
Mutator mutT protein {ECO:0000313|EMBL:EOQ35869.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
NUDIX hydrolase
L1_008_000M1_scaffold_1285_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4095..6065)
-----------------
DNA (1971bp)
protein (657aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BHQ6_9CLOT
hypothetical protein
L1_008_000M1_scaffold_1285_5
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6062..6772)
-----------------
DNA (711bp)
protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AK97_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42269.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
transcriptional regulator
L1_008_000M1_scaffold_1285_6
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(7014..8864)
-----------------
DNA (1851bp)
protein (617aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035DBE1D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW68884.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
L1_008_000M1_scaffold_1285_7
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9087..11126
-----------------
DNA (2040bp)
protein (680aa)
glgB1; 1,4-alpha-glucan-branching enzyme 1 (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
1,4-alpha-glucan branching enzyme n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LXH4_CLOCD
L1_008_000M1_scaffold_1285_8
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11227..12507
-----------------
DNA (1281bp)
protein (427aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5V533_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCZ83234.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
hypothetical protein
L1_008_000M1_scaffold_1285_9
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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12587..13234
-----------------
DNA (648bp)
protein (216aa)
Epoxide hydrolase domain-like phosphatase n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HT95_9FUSO
Epoxide hydrolase domain-like phosphatase {ECO:0000313|EMBL:EFS27054.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
HAD-superfamily hydrolase, subfamily IA, variant 3
L1_008_000M1_scaffold_1285_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13261..14115
-----------------
DNA (855bp)
protein (285aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IER5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50279.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
phage-related lysozyme (muraminidase)
L1_008_000M1_scaffold_1285_11
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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14288..16279
-----------------
DNA (1992bp)
protein (664aa)
TRAP transporter, 4TM/12TM fusion protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RWS5_SPHGB
TRAP transporter 4TM/12TM fusion protein
Tax=BJP_08E140C01_Spirochaeta_53_29
L1_008_000M1_scaffold_1285_12
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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16469..17416
-----------------
DNA (948bp)
protein (316aa)
TRAP transporter solute receptor, TAXI family n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QSW8_SPHPG
TRAP transporter solute receptor, TAXI family
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:AEV30150.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
L1_008_000M1_scaffold_1285_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17442..18416
-----------------
DNA (975bp)
protein (325aa)
Phosphoglycerate dehydrogenase (EC:1.1.1.95)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZN60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44819.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L1_008_000M1_scaffold_1285_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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18608..19918
-----------------
DNA (1311bp)
protein (437aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57455.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
family 1 extracellular solute-binding protein
L1_008_000M1_scaffold_1285_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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20027..20923
-----------------
DNA (897bp)
protein (299aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57454.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter
L1_008_000M1_scaffold_1285_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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20910..21764
-----------------
DNA (855bp)
protein (285aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57453.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter
L1_008_000M1_scaffold_1285_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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21761..22873
-----------------
DNA (1113bp)
protein (371aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VIA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90139.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L1_008_000M1_scaffold_1285_18
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22876..23640
-----------------
DNA (765bp)
protein (255aa)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F744_CLOS4
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:ERJ01102.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
glycerophosphoryl diester phosphodiesterase
L1_008_000M1_scaffold_1285_19
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23633..24352
-----------------
DNA (720bp)
protein (240aa)
Putative hydrolase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LKC5_9FIRM
Putative hydrolase {ECO:0000313|EMBL:EET59006.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
PHP domain-containing protein
L1_008_000M1_scaffold_1285_20
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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25600..26559
-----------------
DNA (960bp)
protein (320aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AMM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX40496.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
Displaying 20 items

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