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L1_008_000M1_scaffold_1435

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1435_1
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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comp(75..2999)
DNA (2925bp) protein (975aa)
Peptidoglycan-binding lysin domain protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AHW4_9FIRM
fibronectin type III domain-containing protein
Peptidoglycan-binding lysin domain protein {ECO:0000313|EMBL:CCX40447.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
L1_008_000M1_scaffold_1435_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3159..4007
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R7A062_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36132.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1435_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(4099..5262)
DNA (1164bp) protein (388aa)
Oxidoreductase aldo/keto reductase family n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RQC5_9FIRM
Oxidoreductase aldo/keto reductase family {ECO:0000313|EMBL:CDC47514.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
putative oxidoreductase of aldo/keto reductase family
L1_008_000M1_scaffold_1435_4
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(5444..5977)
DNA (534bp) protein (178aa)
Rubrerythrin n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F293_9FIRM
Rubrerythrin {ECO:0000313|EMBL:CDB03504.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
rbr2; rubrerythrin
L1_008_000M1_scaffold_1435_5
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6197..7528)
DNA (1332bp) protein (444aa)
MATE efflux family protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GWI1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCY17097.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_1435_6
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7521..8141)
DNA (621bp) protein (207aa)
Cytidylate kinase n=1 Tax=Clostridium sp. CAG:448 RepID=R6TVP1_9CLOT
Cytidylate kinase {ECO:0000313|EMBL:CDC62662.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
cytidylate kinase
L1_008_000M1_scaffold_1435_7
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8272..9156
DNA (885bp) protein (295aa)
LysR substrate binding domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LCH5_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EET61639.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Transcriptional regulator
L1_008_000M1_scaffold_1435_8
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9331..10761)
DNA (1431bp) protein (477aa)
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase {ECO:0000256|HAMAP-Rule:MF_00397}; Short=2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase {ECO:0000256|HAMAP-Rule:MF_00397};; EC=2.4.2.52 {ECO:0000256|HAMAP-Rule:MF_00397};; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
holo-ACP synthase CitX/triphosphoribosyl-dephospho-CoA synthase CitG (EC:2.7.8.25)
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase n=1 Tax=Clostridium sp. CAG:242 RepID=R6DJ67_9CLOT
L1_008_000M1_scaffold_1435_9
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10900..11946
DNA (1047bp) protein (349aa)
[citrate (Pro-3S)-lyase] ligase {ECO:0000313|EMBL:EJF40604.1}; EC=6.2.1.22 {ECO:0000313|EMBL:EJF40604.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
citrate lyase ligase (EC:6.2.1.22)
[citrate (Pro-3S)-lyase] ligase n=1 Tax=Clostridium sp. MSTE9 RepID=J0N1L3_9CLOT
L1_008_000M1_scaffold_1435_10
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12155..13522)
DNA (1368bp) protein (456aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase {ECO:0000313|EMBL:ADU20655.1}; EC=6.1.1.11 {ECO:0000313|EMBL:ADU20655.1};; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
Seryl-tRNA synthetase n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UBR3_RUMA7
L1_008_000M1_scaffold_1435_11
Rhizoctonia solani, Rhizoctonia, Cantharellales, Agaricomycetes, Basidiomycota, Fungi

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13977..16592
DNA (2616bp) protein (872aa)
Putative uncharacterized protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JQ30_SYNJB
Cell surface glycoprotein 1 OS=Clostridium thermocellum (Strain ATCC 27405 / DSM 1237) GN=olpB PE=4 SV=2 {ECO:0000313|EMBL:CEL57757.1}; TaxID=1108050 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Cantharellales; Ceratobasidiaceae; mitosporic Ceratobasidiaceae; Rhizoctonia.;" source="Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) (Lettuce; bottom rot fungus) (Rhizoctonia solani).;"
filamentous hemagglutinin family domain-containing protein
L1_008_000M1_scaffold_1435_12
unknown

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16607..17422
DNA (816bp) protein (272aa)

This feature has no annotations

L1_008_000M1_scaffold_1435_13
CG_Micra_06, Micraarchaeota, Archaea

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17493..19913
DNA (2421bp) protein (807aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIM9_SINAD
hypothetical protein
Tax=CG_Micra_06
L1_008_000M1_scaffold_1435_14
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20074..20817
DNA (744bp) protein (248aa)
F420-0:Gamma-glutamyl ligase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9S4_9FIRM
F420-0:Gamma-glutamyl ligase {ECO:0000313|EMBL:CDE48644.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L1_008_000M1_scaffold_1435_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20884..21777
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IEB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50164.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
auxin efflux carrier
L1_008_000M1_scaffold_1435_16
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(21853..23259)
DNA (1407bp) protein (469aa)
Membrane protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y807_9BACT
Membrane protein {ECO:0000313|EMBL:EFB89544.1}; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscolens W5455.;"
hypothetical protein
Displaying 16 items

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