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L1_008_000M1_scaffold_1482

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1482_1
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(550..840)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI000373CF87
Uncharacterized protein {ECO:0000313|EMBL:CDE50328.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L1_008_000M1_scaffold_1482_2
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1112..1507
DNA (396bp) protein (132aa)
Helix-turn-helix n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4IY35_BUTFI
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBK75678.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L1_008_000M1_scaffold_1482_3
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1575..2021)
DNA (447bp) protein (149aa)
YqeY-like protein n=2 Tax=Clostridium RepID=A7VH13_9CLOT
YqeY-like protein {ECO:0000313|EMBL:EDO57024.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L1_008_000M1_scaffold_1482_4
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2071..3483)
DNA (1413bp) protein (471aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Glucose-6-phosphate isomerase n=1 Tax=Clostridium sp. CAG:349 RepID=R6XST0_9CLOT
glucose-6-phosphate isomerase
L1_008_000M1_scaffold_1482_5
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3544..4347)
DNA (804bp) protein (268aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IES2_9FIRM
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:CDE50125.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
sugar phosphate isomerase/epimerase
L1_008_000M1_scaffold_1482_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4495..6525
DNA (2031bp) protein (677aa)
UPF0313 protein CLOBAR_01060 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ID87_9FIRM
UPF0313 protein CLOBAR_01060 {ECO:0000313|EMBL:CDE49759.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
radical SAM protein
L1_008_000M1_scaffold_1482_7
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(6522..6935)
DNA (414bp) protein (138aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Mutator MutT protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6M166_9FIRM
Mutator MutT protein {ECO:0000313|EMBL:CDB88161.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_1482_8
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7120..8337
DNA (1218bp) protein (406aa)
Flavoprotein, HI0933 family n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0FAZ5_DESDL
flavoprotein
Flavoprotein, HI0933 family {ECO:0000313|EMBL:AGA70190.1}; Flags: Precursor;; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L1_008_000M1_scaffold_1482_9
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8340..9950
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037B25B5
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EJF41726.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Uncharacterized FAD-dependent dehydrogenases
L1_008_000M1_scaffold_1482_10
unknown

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comp(9944..10672)
DNA (729bp) protein (243aa)

This feature has no annotations

L1_008_000M1_scaffold_1482_11
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

10753..11508
DNA (756bp) protein (252aa)
Uncharacterized protein id=3361060 bin=GWC2_Clostridiales_40_7 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
hypothetical protein
Tax=GWC2_Clostridiales_40_7_curated
L1_008_000M1_scaffold_1482_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11612..12247)
DNA (636bp) protein (212aa)
Probable GTP-binding protein EngB n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8L2_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
GTP-binding protein YsxC
L1_008_000M1_scaffold_1482_13
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12263..14614)
DNA (2352bp) protein (784aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Lon-A peptidase (EC:3.4.21.53)
Lon protease n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7W1_9FIRM
L1_008_000M1_scaffold_1482_14
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(14865..16115)
DNA (1251bp) protein (417aa)
Polysaccharide biosynthesis protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WIV4_EGGLE
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ACV55996.1}; Flags: Precursor;; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L1_008_000M1_scaffold_1482_15
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16138..17322)
DNA (1185bp) protein (395aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJS9_ALKMQ
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABR46447.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
L1_008_000M1_scaffold_1482_16
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17322..18428)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJS8_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR46446.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
L1_008_000M1_scaffold_1482_17
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18432..18821)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7I1M9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE45555.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
hypothetical protein
L1_008_000M1_scaffold_1482_18
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18825..19538)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IPG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23716.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
glycosyl transferase
L1_008_000M1_scaffold_1482_19
unknown

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comp(19544..21958)
DNA (2415bp) protein (805aa)

This feature has no annotations

L1_008_000M1_scaffold_1482_20
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22383..22589)
DNA (207bp) protein (69aa)
ABC transporter, ATP-binding protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBI0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EET61783.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_1482_21
unknown

Not on your lists

comp(22534..22638)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 21 items

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