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L1_008_000M1_scaffold_1493

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1493_1
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..493
DNA (492bp) protein (164aa)
Polysaccharide deacetylase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I540_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CDE46363.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
polysaccharide deacetylase
L1_008_000M1_scaffold_1493_2
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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506..1186
DNA (681bp) protein (227aa)
Single-strand binding protein/Primosomal replication protein n n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I767_9FIRM
Single-strand binding protein/Primosomal replication protein n {ECO:0000313|EMBL:CDE46362.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
single-stranded DNA-binding protein
L1_008_000M1_scaffold_1493_3
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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1308..1622
DNA (315bp) protein (105aa)
TrpR like protein, YerC/YecD n=1 Tax=Thermincola potens (strain JR) RepID=D5XD51_THEPJ
TrpR-like protein YerC/YecD
TrpR like protein, YerC/YecD {ECO:0000313|EMBL:ADG81699.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
L1_008_000M1_scaffold_1493_4
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1619..4015
DNA (2397bp) protein (799aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
DNA helicase II n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IMU4_9FIRM
L1_008_000M1_scaffold_1493_5
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4024..6051
DNA (2028bp) protein (676aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
DNA ligase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJZ8_9FIRM
NAD-dependent DNA ligase
L1_008_000M1_scaffold_1493_6
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6161..7033
DNA (873bp) protein (291aa)
YicC-like domain-containing protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ANP0_9CLOT
YicC-like domain-containing protein {ECO:0000313|EMBL:CCX42407.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L1_008_000M1_scaffold_1493_7
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7055..7330
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2C1E0
hypothetical protein
UPF0296 protein TCEL_01795 {ECO:0000256|HAMAP-Rule:MF_01503}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
L1_008_000M1_scaffold_1493_8
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7330..7911
DNA (582bp) protein (194aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Clostridium sp. CAG:306 RepID=R6PBQ4_9CLOT
L1_008_000M1_scaffold_1493_9
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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7964..8185
DNA (222bp) protein (74aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EJ21_9FIRM
L1_008_000M1_scaffold_1493_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8175..9377
DNA (1203bp) protein (401aa)
phosphopantothenoylcysteine decarboxylase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IGR6_9FIRM
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:CDE49747.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L1_008_000M1_scaffold_1493_11
unknown

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9490..9942
DNA (453bp) protein (151aa)

This feature has no annotations

L1_008_000M1_scaffold_1493_12
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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9997..11259
DNA (1263bp) protein (421aa)
Protein translocase subunit SecD n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A277_MAHA5
protein-export membrane protein SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L1_008_000M1_scaffold_1493_13
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11281..12186
DNA (906bp) protein (302aa)
Protein-export membrane protein SecF n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIB4_9FIRM
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
protein translocase subunit secF
L1_008_000M1_scaffold_1493_14
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12296..13273
DNA (978bp) protein (326aa)
recJ; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIS0_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CDE51530.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L1_008_000M1_scaffold_1493_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13254..14687
DNA (1434bp) protein (478aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIS0_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CDE51530.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
single-stranded-DNA-specific exonuclease RecJ
L1_008_000M1_scaffold_1493_16
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14668..16854
DNA (2187bp) protein (729aa)
(P)ppGpp synthetase I SpoT/RelA n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIA9_9FIRM
(P)ppGpp synthetase I SpoT/RelA {ECO:0000313|EMBL:CDE51529.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
SpoT; guanosine polyphosphate pyrophosphohydrolase/synthetase
L1_008_000M1_scaffold_1493_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16878..17327
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCJ1_9CLOT
D-tyrosyl-tRNA(Tyr) deacylase
L1_008_000M1_scaffold_1493_18
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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17327..17932
DNA (606bp) protein (202aa)
Beta-lactamase domain protein n=2 Tax=Desulfotomaculum RepID=F6B2Z2_DESCC
beta-lactamase domain-containing protein
Tax=BJP_IG2158_Zixibacteria_48_33
L1_008_000M1_scaffold_1493_19
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17929..19386
DNA (1458bp) protein (486aa)
coproporphyrinogen III oxidase (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJ59_9FIRM
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:CDE51521.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L1_008_000M1_scaffold_1493_20
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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19414..20385
DNA (972bp) protein (324aa)
Uronate isomerase {ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|SAAS:SAAS00013438};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RLD1_MOOTA
hypothetical protein
L1_008_000M1_scaffold_1493_21
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20401..20925
DNA (525bp) protein (175aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIR0_9FIRM
peptidyl-prolyl cis-trans isomerase
L1_008_000M1_scaffold_1493_22
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20939..21208
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7II97_9FIRM
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L1_008_000M1_scaffold_1493_23
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21265..23610
DNA (2346bp) protein (782aa)
Peptidase U32 family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJM0_9FIRM
Peptidase U32 family {ECO:0000313|EMBL:CDE51518.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
peptidase U32
L1_008_000M1_scaffold_1493_24
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23623..25995
DNA (2373bp) protein (791aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Endonuclease MutS2 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ILL5_9FIRM
MutS2 family protein
L1_008_000M1_scaffold_1493_25
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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26095..27237
DNA (1143bp) protein (381aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IHZ2_THETR
trypsin-like serine protease with C-terminal PDZ domain
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:AGB18364.1}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum M0795.;"
L1_008_000M1_scaffold_1493_26
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27288..28766
DNA (1479bp) protein (493aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Stage IV sporulation protein A n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I3V6_9FIRM
stage IV sporulation protein A
L1_008_000M1_scaffold_1493_27
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29164..30495
DNA (1332bp) protein (444aa)
Electron transport complex protein RnfC n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5V0_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
RnfABCDGE type electron transport complex subunit C
L1_008_000M1_scaffold_1493_28
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30518..31459
DNA (942bp) protein (314aa)
Electron transport complex RnfABCDGE type D subunit n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I6A7_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
rnfD; electron transport complex protein, subunit D
L1_008_000M1_scaffold_1493_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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31459..33558
DNA (2100bp) protein (700aa)
Electron transport complex, rnfabcdge type, G subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNA9_9FIRM
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
rnfG; Electron transport complex protein
L1_008_000M1_scaffold_1493_30
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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33559..34155
DNA (597bp) protein (199aa)
Na(+)-translocating NADH-quinone reductase D subunit n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I930_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
protein RnfE
Displaying items 1-30 of 47 in total

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