ggKbase home page

L1_008_000M1_scaffold_1671

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1671_1
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56..1123)
DNA (1068bp) protein (356aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IEP3_9FIRM
L1_008_000M1_scaffold_1671_2
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1123..2823)
DNA (1701bp) protein (567aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
N utilization substance protein B-like protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IE52_9FIRM
sun protein
L1_008_000M1_scaffold_1671_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2827..3750)
DNA (924bp) protein (308aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Methionyl-tRNA formyltransferase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFJ1_9FIRM
methionyl-tRNA formyltransferase
L1_008_000M1_scaffold_1671_4
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(3769..4311)
DNA (543bp) protein (181aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Peptide deformylase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EYR5_9FIRM
peptide deformylase
L1_008_000M1_scaffold_1671_5
unknown

Not on your lists

4353..4484
DNA (132bp) protein (44aa)

This feature has no annotations

L1_008_000M1_scaffold_1671_6
unknown

Not on your lists

4583..4921
DNA (339bp) protein (113aa)

This feature has no annotations

L1_008_000M1_scaffold_1671_7
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4899..7139)
DNA (2241bp) protein (747aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Primosomal protein N n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IE47_9FIRM
primosomal replication factor Y
L1_008_000M1_scaffold_1671_8
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7242..8144
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N2M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77565.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
putative DeoR family transcriptional regulator
L1_008_000M1_scaffold_1671_9
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8207..8488
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FMA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS73345.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
L1_008_000M1_scaffold_1671_10
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8469..9521)
DNA (1053bp) protein (351aa)
A/G-specific adenine glycosylase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67NN1_SYMTH
A/G-specific adenine glycosylase
A/G-specific adenine glycosylase {ECO:0000313|EMBL:BAD40712.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
L1_008_000M1_scaffold_1671_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9795..10082
DNA (288bp) protein (96aa)
10 kDa chaperonin n=2 Tax=Roseburia RepID=C0FRK5_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Co-chaperonin GroES (HSP10)
L1_008_000M1_scaffold_1671_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10191..11822
DNA (1632bp) protein (544aa)
60 kDa chaperonin n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I3A3_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
groEL; chaperonin GroEL
L1_008_000M1_scaffold_1671_13
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12025..12942)
DNA (918bp) protein (306aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RKI5_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDC49408.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
ComEC2; metallo-beta-lactamase fold hydrolase
L1_008_000M1_scaffold_1671_14
unknown

Not on your lists

comp(12982..13128)
DNA (147bp) protein (49aa)

This feature has no annotations

L1_008_000M1_scaffold_1671_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13265..14743
DNA (1479bp) protein (493aa)
S-layer protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8E1_9FIRM
S-layer protein {ECO:0000313|EMBL:CDE46767.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L1_008_000M1_scaffold_1671_16
unknown

Not on your lists

comp(14730..15584)
DNA (855bp) protein (285aa)

This feature has no annotations

L1_008_000M1_scaffold_1671_17

Not on your lists

15753..18938
DNA (3186bp) protein (1062aa)
Spore coat protein CotH n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEB0_9FIRM
Putative spore coat protein CotH {ECO:0000313|EMBL:AIF26237.1}; TaxID=1489288 species="Bacteria; environmental samples.;" source="uncultured bacterium Lq_007_G03.;"
hypothetical protein
L1_008_000M1_scaffold_1671_18

Not on your lists

19063..19737
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5H0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AIF26238.1}; TaxID=1489288 species="Bacteria; environmental samples.;" source="uncultured bacterium Lq_007_G03.;"
hypothetical protein
L1_008_000M1_scaffold_1671_19

Not on your lists

19750..20370
DNA (621bp) protein (207aa)
VTC domain-containing protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4T6_9FIRM
Putative vTC domain-containing protein {ECO:0000313|EMBL:AIF26239.1}; TaxID=1489288 species="Bacteria; environmental samples.;" source="uncultured bacterium Lq_007_G03.;"
VTC domain-containing protein
L1_008_000M1_scaffold_1671_20
unknown

Not on your lists

20412..20699
DNA (288bp) protein (96aa)

This feature has no annotations

Displaying 20 items

View Taxonomy