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L1_008_000M1_scaffold_1684

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1684_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..2290
DNA (2289bp) protein (763aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI80_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFQ07125.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Signal transduction histidine kinase
L1_008_000M1_scaffold_1684_2
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(2734..4011)
DNA (1278bp) protein (426aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RTD8_SPHGB
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ADY14369.1}; Flags: Precursor;; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
L1_008_000M1_scaffold_1684_3
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(4048..4536)
DNA (489bp) protein (163aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RTC4_SPHGB
tripartite ATP-independent periplasmic transporter DctQ component
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ADY14368.1}; Flags: Precursor;; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
L1_008_000M1_scaffold_1684_4
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(4556..5539)
DNA (984bp) protein (328aa)
Extracellular solute-binding protein, family 7 n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RTC3_SPHGB
extracellular solute-binding protein, family 7
Extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:ADY14367.1}; Flags: Precursor;; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
L1_008_000M1_scaffold_1684_5
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(5760..6569)
DNA (810bp) protein (270aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RTD9_SPHGB
xylose isomerase
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:ADY14370.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
L1_008_000M1_scaffold_1684_6
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(6646..8472)
DNA (1827bp) protein (609aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DBS6_9CLOT
integral membrane sensor signal transduction histidine kinase
Tax=BJP_08E140C01_Spirochaeta_53_29
L1_008_000M1_scaffold_1684_7
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(8465..9241)
DNA (777bp) protein (259aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DBS7_9CLOT
AraC family transcriptional regulator
Tax=BJP_08E140C01_Spirochaeta_53_29
L1_008_000M1_scaffold_1684_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9609..10733)
DNA (1125bp) protein (375aa)
acetylornithine deacetylase (EC:3.5.1.16)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58014.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L1_008_000M1_scaffold_1684_9
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10744..11976)
DNA (1233bp) protein (411aa)
L-threonine synthase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AKM5_9CLOT
L-threonine synthase {ECO:0000313|EMBL:CCX41362.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
threonine synthase
L1_008_000M1_scaffold_1684_10
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12006..13229)
DNA (1224bp) protein (408aa)
Amidohydrolase family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H0K6_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:EJF38728.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L1_008_000M1_scaffold_1684_11
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13302..14576)
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSS5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95497.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
putative TRAP-type C4-dicarboxylate transport system, large permease component
L1_008_000M1_scaffold_1684_12
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14589..15077)
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95498.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Tripartite ATP-independent periplasmic transporter DctQ component
L1_008_000M1_scaffold_1684_13
bacterium UASB270, Bacteria

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comp(15166..15681)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSS7_9CLOT
Putative C4-dicarboxylate ABC transporter substrate binding protein {ECO:0000313|EMBL:GAK59918.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L1_008_000M1_scaffold_1684_14
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15715..16152)
DNA (438bp) protein (146aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B68C7C
Uncharacterized protein {ECO:0000313|EMBL:KEO50446.1}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;"
hypothetical protein
L1_008_000M1_scaffold_1684_15
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16470..16934
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHH6_9CLOT
Endoribonuclease L-PSP {ECO:0000313|EMBL:KJJ70035.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
endoribonuclease L-PSP
L1_008_000M1_scaffold_1684_16
unknown

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16980..17558
DNA (579bp) protein (193aa)

This feature has no annotations

L1_008_000M1_scaffold_1684_17
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(17698..18366)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248DC88
Uncharacterized protein {ECO:0000313|EMBL:KIL42002.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
hypothetical protein
L1_008_000M1_scaffold_1684_18
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18901..19359)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97013.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L1_008_000M1_scaffold_1684_19
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19322..19492)
DNA (171bp) protein (57aa)
Kynurenine formamidase {ECO:0000313|EMBL:KJJ68283.1}; EC=3.5.1.9 {ECO:0000313|EMBL:KJJ68283.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNH0_9CLOT
L1_008_000M1_scaffold_1684_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19523..20440)
DNA (918bp) protein (306aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
2-dehydropantoate 2-reductase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EL78_9FIRM
Ketopantoate reductase PanE/ApbA
L1_008_000M1_scaffold_1684_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20456..20923)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57428.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L1_008_000M1_scaffold_1684_22
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20953..21792)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MIB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70750.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
cation/cationic drug transporter
L1_008_000M1_scaffold_1684_23
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21850..22200)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HIJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98740.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Thermophilic glucose-6-phosphate isomerase and related metalloenzymes
L1_008_000M1_scaffold_1684_24
unknown

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comp(22415..22636)
DNA (222bp) protein (74aa)

This feature has no annotations

L1_008_000M1_scaffold_1684_25
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22736..23575)
DNA (840bp) protein (280aa)
Cobalt transport protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EAJ9_9FIRM
Cobalt transport protein {ECO:0000313|EMBL:CDD99954.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L1_008_000M1_scaffold_1684_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23565..25277)
DNA (1713bp) protein (571aa)
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4R3_9FIRM
Cobalt ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU97099.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L1_008_000M1_scaffold_1684_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25360..25911)
DNA (552bp) protein (184aa)
UPF0397 protein FAEPRAA2165_01279 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4R4_9FIRM
UPF0397 protein FAEPRAA2165_01279 {ECO:0000256|HAMAP-Rule:MF_01572}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted membrane protein
L1_008_000M1_scaffold_1684_28
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26258..27304)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XZ95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ68990.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
binding-protein-dependent transporters inner membrane component
L1_008_000M1_scaffold_1684_29
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27308..28249)
DNA (942bp) protein (314aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=D3ALC5_9CLOT
Sugar ABC transporter permease protein {ECO:0000313|EMBL:CCZ58070.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
binding-protein-dependent transporters inner membrane component
L1_008_000M1_scaffold_1684_30
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28333..29598)
DNA (1266bp) protein (422aa)
ABC transporter, solute-binding protein n=2 Tax=Clostridium RepID=D3ALC4_9CLOT
Periplasmic pectic oligomers binding protein {ECO:0000313|EMBL:CCZ58069.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
extracellular solute-binding protein
Displaying items 1-30 of 43 in total

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