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L1_008_000M1_scaffold_1740

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1740_1
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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comp(490..1872)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZIK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD45945.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_1740_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2179..3447)
DNA (1269bp) protein (423aa)
TRAP transporter, DctM subunit n=2 Tax=Clostridiales RepID=D7GSE3_9FIRM
TRAP transporter, DctM subunit
TRAP transporter, DctM subunit {ECO:0000313|EMBL:CBL40725.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_008_000M1_scaffold_1740_3
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3447..3938)
DNA (492bp) protein (164aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Clostridium sp. CAG:81 RepID=R5G4Y1_9CLOT
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:CCY12380.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Tripartite ATP-independent periplasmic transporter DctQ component
L1_008_000M1_scaffold_1740_4
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4026..5003)
DNA (978bp) protein (326aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GSE4_9FIRM
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family {ECO:0000313|EMBL:CBL40726.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_008_000M1_scaffold_1740_5
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5594..6232
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IBD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE47807.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L1_008_000M1_scaffold_1740_6
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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6401..8716
DNA (2316bp) protein (772aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EDN01110.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EDN01110.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ribonucleoside-triphosphate reductase catalytic subunit (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NS72_9FIRM
L1_008_000M1_scaffold_1740_7
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8878..9384
DNA (507bp) protein (169aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFW6_9FIRM
L1_008_000M1_scaffold_1740_8
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9562..10491
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I6P4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46928.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L1_008_000M1_scaffold_1740_9
unknown

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10652..10981
DNA (330bp) protein (110aa)

This feature has no annotations

L1_008_000M1_scaffold_1740_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11006..12976
DNA (1971bp) protein (657aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ICP1_9FIRM
L1_008_000M1_scaffold_1740_11
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13165..15735
DNA (2571bp) protein (857aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IC49_9FIRM
L1_008_000M1_scaffold_1740_12
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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16069..16953
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO08112.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
membrane protein
L1_008_000M1_scaffold_1740_13
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17045..18418
DNA (1374bp) protein (458aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
asnS; Asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IBZ6_9FIRM
L1_008_000M1_scaffold_1740_14
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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18584..19294
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KQL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48491.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L1_008_000M1_scaffold_1740_15
unknown

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19291..19617
DNA (327bp) protein (109aa)

This feature has no annotations

Displaying 15 items

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