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L1_008_000M1_scaffold_2011

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2011_1
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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196..1167
DNA (972bp) protein (324aa)
NitT/TauT family transport system substrate-binding protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KJL0_9FIRM
NitT/TauT family transport system substrate-binding protein {ECO:0000313|EMBL:EGN31398.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_008_000M1_scaffold_2011_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1167..1913
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32340.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
binding-protein-dependent transport system inner membrane protein
L1_008_000M1_scaffold_2011_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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1910..2506
DNA (597bp) protein (199aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSU3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN00920.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_008_000M1_scaffold_2011_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2597..4528)
DNA (1932bp) protein (644aa)
FAD binding domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8D9_9FIRM
FAD binding domain protein {ECO:0000313|EMBL:EEF67755.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
fumarate reductase
L1_008_000M1_scaffold_2011_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4783..5955
DNA (1173bp) protein (391aa)
Transcriptional regulator, AraC family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8E0_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEF67756.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L1_008_000M1_scaffold_2011_6
unknown

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5976..6362
DNA (387bp) protein (129aa)

This feature has no annotations

L1_008_000M1_scaffold_2011_7
unknown

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6489..8006
DNA (1518bp) protein (506aa)

This feature has no annotations

L1_008_000M1_scaffold_2011_8
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8651..10420)
DNA (1770bp) protein (590aa)
Oligoendopeptidase pepF/M3 family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8H3_9FIRM
Oligoendopeptidase pepF/M3 family {ECO:0000313|EMBL:CDE47910.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
pepF/M3 family oligoendopeptidase
L1_008_000M1_scaffold_2011_9
unknown

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10435..10590
DNA (156bp) protein (52aa)

This feature has no annotations

L1_008_000M1_scaffold_2011_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10655..12379
DNA (1725bp) protein (575aa)
alpha-phosphoglucomutase (EC:5.4.2.2 5.4.2.8)
Phosphomannomutase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJ37_9FIRM
Phosphomannomutase {ECO:0000313|EMBL:CDE51650.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L1_008_000M1_scaffold_2011_11
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12619..14010
DNA (1392bp) protein (464aa)
Permeases n=1 Tax=Clostridium sp. CAG:43 RepID=R7AR22_9CLOT
Permeases {ECO:0000313|EMBL:CDD55871.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Permeases
L1_008_000M1_scaffold_2011_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14365..15639
DNA (1275bp) protein (425aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7J6_9FIRM
DNA methylase N-4/N-6 domain protein {ECO:0000313|EMBL:CDE46497.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
DNA methylase N-4/N-6 domain-containing protein
L1_008_000M1_scaffold_2011_13
unknown

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15770..16366
DNA (597bp) protein (199aa)

This feature has no annotations

L1_008_000M1_scaffold_2011_14
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16363..17148
DNA (786bp) protein (262aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8I5_9FIRM
trmD; tRNA methyltransferase
Displaying 14 items

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