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L1_008_000M1_scaffold_2170

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2170_1
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(43..2193)
DNA (2151bp) protein (717aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJZ5_9FIRM
L1_008_000M1_scaffold_2170_2
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2398..2661)
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KCV6_CLOPA
ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L1_008_000M1_scaffold_2170_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2827..3753)
DNA (927bp) protein (309aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
ribC; putative riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
FMN adenylyltransferase / riboflavin kinase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IGM2_9FIRM
L1_008_000M1_scaffold_2170_4
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3790..4668)
DNA (879bp) protein (293aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
tRNA pseudouridine synthase B n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFT6_9FIRM
truB; tRNA pseudouridine synthase B
L1_008_000M1_scaffold_2170_5
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4665..5666)
DNA (1002bp) protein (334aa)
Phosphoesterase RecJ domain protein n=1 Tax=Clostridium sp. CAG:780 RepID=R5PM91_9CLOT
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:CCZ17745.1}; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:780.;"
phosphoesterase RecJ domain-containing protein
L1_008_000M1_scaffold_2170_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5641..6033)
DNA (393bp) protein (131aa)
Ribosome-binding factor A n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IGM5_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
ribosome-binding factor A
L1_008_000M1_scaffold_2170_7
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6113..8749)
DNA (2637bp) protein (879aa)
Translation initiation factor IF-2 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFU1_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
translation initiation factor IF-2
L1_008_000M1_scaffold_2170_8
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8792..9133)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EFE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98590.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
ribosomal protein L7Ae/L30e/S12e/Gadd45
L1_008_000M1_scaffold_2170_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(9123..9368)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IM31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46441.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L1_008_000M1_scaffold_2170_10
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(9405..10595)
DNA (1191bp) protein (397aa)
Transcription termination factor NusA n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKC1_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
nusA; putative transcription elongation protein NusA
L1_008_000M1_scaffold_2170_11
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10567..11082)
DNA (516bp) protein (172aa)
Ribosome maturation factor RimP n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFV3_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L1_008_000M1_scaffold_2170_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11327..15673)
DNA (4347bp) protein (1449aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
DNA polymerase III polC-type n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4A2_9FIRM
DNA polymerase III subunit alpha
Displaying 12 items

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