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L1_008_000M1_scaffold_2955

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2955_1
unknown

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comp(3..161)
DNA (159bp) protein (53aa)

This feature has no annotations

L1_008_000M1_scaffold_2955_2
unknown

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163..354
DNA (192bp) protein (64aa)

This feature has no annotations

L1_008_000M1_scaffold_2955_3
unknown

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386..928
DNA (543bp) protein (181aa)

This feature has no annotations

L1_008_000M1_scaffold_2955_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(840..1292)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9WQE6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ05326.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L1_008_000M1_scaffold_2955_5
unknown

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1594..1818
DNA (225bp) protein (75aa)

This feature has no annotations

L1_008_000M1_scaffold_2955_6
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2059..3804)
DNA (1746bp) protein (582aa)
DNA repair protein RecN n=1 Tax=Clostridium sp. CAG:138 RepID=R6ASR9_9CLOT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
DNA repair protein RecN
L1_008_000M1_scaffold_2955_7
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3820..4269)
DNA (450bp) protein (150aa)
Arginine repressor n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I6X3_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
argR; arginine repressor ArgR
L1_008_000M1_scaffold_2955_8
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4294..5178)
DNA (885bp) protein (295aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I924_9FIRM
inorganic polyphosphate/ATP-NAD kinase
L1_008_000M1_scaffold_2955_9
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5207..6025)
DNA (819bp) protein (273aa)
Hemolysin A n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I6A2_9FIRM
Hemolysin A {ECO:0000313|EMBL:CDE47021.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hemolysin TlyA family protein
L1_008_000M1_scaffold_2955_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6015..7910)
DNA (1896bp) protein (632aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5U5_9FIRM
L1_008_000M1_scaffold_2955_11
Clostridium sp. CAG:433, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7927..8496)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:433 RepID=R6Y4S9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD28880.1}; TaxID=1262806 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:433.;"
hypothetical protein
L1_008_000M1_scaffold_2955_12
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9184..9633)
DNA (450bp) protein (150aa)
Divergent PAP2 family protein n=2 Tax=Desulfitobacterium hafniense RepID=G9XL71_DESHA
hypothetical protein
Divergent PAP2 family protein {ECO:0000313|EMBL:EHL07588.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
L1_008_000M1_scaffold_2955_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(9652..10563)
DNA (912bp) protein (304aa)
Geranylgeranyl pyrophosphate synthase n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RAC7_THETN
IspA; geranylgeranyl pyrophosphate synthase
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:AAM24520.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
L1_008_000M1_scaffold_2955_14
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10550..10783)
DNA (234bp) protein (78aa)
exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease VII, small subunit {ECO:0000313|EMBL:ABE52421.1}; EC=3.1.11.6 {ECO:0000313|EMBL:ABE52421.1};; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
Exodeoxyribonuclease VII, small subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VV5_METBU
L1_008_000M1_scaffold_2955_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10761..11987)
DNA (1227bp) protein (409aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CM37_9FIRM
Displaying 15 items

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