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L1_008_000M1_scaffold_867

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_867_1
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1..1500)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2B1J5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AEH37652.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6).;"
hypothetical protein
L1_008_000M1_scaffold_867_2
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(1728..2102)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBQ5_9BACT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
50S ribosomal protein L7/L12
L1_008_000M1_scaffold_867_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2173..2694)
DNA (522bp) protein (174aa)
50S ribosomal protein L10 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CY38_9CLOT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
50S ribosomal protein L10
L1_008_000M1_scaffold_867_4
unknown

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comp(2886..3737)
DNA (852bp) protein (284aa)

This feature has no annotations

L1_008_000M1_scaffold_867_5
unknown

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comp(3870..4967)
DNA (1098bp) protein (366aa)

This feature has no annotations

L1_008_000M1_scaffold_867_6
unknown

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comp(4964..5500)
DNA (537bp) protein (179aa)
Fis family transcriptional regulator
L1_008_000M1_scaffold_867_7
unknown

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comp(5582..6352)
DNA (771bp) protein (257aa)

This feature has no annotations

L1_008_000M1_scaffold_867_8
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6606..7295)
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LUL9_CLOCD
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_008_000M1_scaffold_867_9
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7403..7831)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7II37_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
rplK; 50S ribosomal protein L11
L1_008_000M1_scaffold_867_10
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8008..8529)
DNA (522bp) protein (174aa)
Transcription termination/antitermination protein NusG n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RS61_9CLOT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
transcription antitermination protein nusG
L1_008_000M1_scaffold_867_11

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comp(8553..8816)
DNA (264bp) protein (88aa)
Protein translocase subunit SecE n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZC02_9ACTN
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1393521 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig1831.;"
secE; putative preprotein translocase subunit secE
L1_008_000M1_scaffold_867_12
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8851..9015)
DNA (165bp) protein (55aa)
50S ribosomal protein L33 n=1 Tax=Clostridium sp. CAG:413 RepID=R6NHA9_9CLOT
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
LSU ribosomal protein L33P
L1_008_000M1_scaffold_867_13
unknown

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comp(9242..9739)
DNA (498bp) protein (166aa)

This feature has no annotations

L1_008_000M1_scaffold_867_14
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

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comp(9736..10953)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CAE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX64643.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
hypothetical protein
L1_008_000M1_scaffold_867_15
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10950..11966)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D44A
Uncharacterized protein {ECO:0000313|EMBL:ERK29448.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
putative ATPase (AAA+ superfamily)
L1_008_000M1_scaffold_867_16
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11998..14004)
DNA (2007bp) protein (669aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IHX1_9FIRM
L1_008_000M1_scaffold_867_17
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14267..14830
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LRW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS61549.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L1_008_000M1_scaffold_867_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15027..15626)
DNA (600bp) protein (200aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKA5_9FIRM
Methylase involved in ubiquinone/menaquinone biosynthesis
Methyltransferase domain protein {ECO:0000313|EMBL:EDS00571.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L1_008_000M1_scaffold_867_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15645..16256)
DNA (612bp) protein (204aa)
Methyltransferase domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYE5_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EDM98911.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
smtA6; SAM-dependent methyltransferase
L1_008_000M1_scaffold_867_20
unknown

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comp(16311..16493)
DNA (183bp) protein (61aa)

This feature has no annotations

L1_008_000M1_scaffold_867_21

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comp(16512..17123)
DNA (612bp) protein (204aa)
Methyltransferase, UbiE/COQ5 family n=1 Tax=human gut metagenome RepID=K1TDA6_9ZZZZ
Methyltransferase, UbiE/COQ5 family {ECO:0000313|EMBL:EKC67723.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_008_000M1_scaffold_867_22
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17226..17441)
DNA (216bp) protein (72aa)
UPF0291 protein BN720_00144 n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NL67_9FIRM
UPF0291 protein BN720_00144 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
hypothetical protein
L1_008_000M1_scaffold_867_23
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(17510..17971)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI000363AD9F
NUDIX hydrolase {ECO:0000313|EMBL:ETT48840.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
hypothetical protein
L1_008_000M1_scaffold_867_24
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17992..19104)
DNA (1113bp) protein (371aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFH7_9FIRM
L1_008_000M1_scaffold_867_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19108..19833)
DNA (726bp) protein (242aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B639_RUMGN
glucosamine-6-phosphate deaminase
L1_008_000M1_scaffold_867_26
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20005..21909)
DNA (1905bp) protein (635aa)
Molecular chaperone-like protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7I7_9FIRM
Molecular chaperone-like protein {ECO:0000313|EMBL:CDE46487.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Molecular chaperone-like protein
L1_008_000M1_scaffold_867_27
unknown

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comp(21912..22754)
DNA (843bp) protein (281aa)

This feature has no annotations

L1_008_000M1_scaffold_867_28
unknown

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22941..23054
DNA (114bp) protein (38aa)

This feature has no annotations

L1_008_000M1_scaffold_867_29
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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23085..23981
DNA (897bp) protein (299aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQQ9_9FIRM
L1_008_000M1_scaffold_867_30
unknown

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24038..24244
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying items 1-30 of 48 in total

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