ggKbase home page

L1_008_000M1_scaffold_977_5

Organism: dasL1_008_000M1_concoct_51_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(6086..6469)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNP5_HALO1 similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 114.0
  • Bit_score: 68
  • Evalue 4.80e-09
Transcriptional regulator {ECO:0000313|EMBL:AJG96780.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.6
  • Coverage: 107.0
  • Bit_score: 72
  • Evalue 4.70e-10
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 114.0
  • Bit_score: 68
  • Evalue 1.40e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium beijerinckii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 384
ATGCACGTCTCGTTCAAGGCCATCGGCCGCAACATCCGCGCCGCGCGCACGGAGCTTGGCATCACGCAGGAGGATGCCGCCGAACGCCTCAAAATTTCCCAGCTTCATTTCGGCCGATTGGAGCGTGGCGAACGTCCGGCCTCTCTTGAAATGCTGGCGAAGATCGCCGGCGTATTCGGGGTTTCGCTTACATCGCTGCTCAACGGCTGTCTCATCGGCGAGGGGTTTGAGCAGCGCCCCAGCGCCGGGCCGGAATCGCTCGGCCAGCGCATCGCTTCCATCGCCAACGGCTGCTCGCCCAAGGCTCAGCGGCTGATGCTTGAGCTTTGCCGCGACGTGGCGCTGAGCGATAAACAGTCGGATTACGAAGAAGAAGAAATCTAA
PROTEIN sequence
Length: 128
MHVSFKAIGRNIRAARTELGITQEDAAERLKISQLHFGRLERGERPASLEMLAKIAGVFGVSLTSLLNGCLIGEGFEQRPSAGPESLGQRIASIANGCSPKAQRLMLELCRDVALSDKQSDYEEEEI*