ggKbase home page

L1_008_000M1_scaffold_977

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_977_1
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

18..860
DNA (843bp) protein (281aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BXJ6_9FIRM
L1_008_000M1_scaffold_977_2
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

873..1241
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DC93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81831.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L1_008_000M1_scaffold_977_3
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1308..1973)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I2F8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA79374.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
TraX protein.
L1_008_000M1_scaffold_977_4
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2243..5995
DNA (3753bp) protein (1251aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:ADG81689.1}; EC=6.3.5.3 {ECO:0000313|EMBL:ADG81689.1};; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Thermincola potens (strain JR) RepID=D5XCR3_THEPJ
L1_008_000M1_scaffold_977_5
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6086..6469)
DNA (384bp) protein (128aa)
Transcriptional regulator, XRE family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNP5_HALO1
Transcriptional regulator {ECO:0000313|EMBL:AJG96780.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
XRE family transcriptional regulator
L1_008_000M1_scaffold_977_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6578..7966)
DNA (1389bp) protein (463aa)
undecaprenyl-phosphate glucose phosphotransferase (EC:2.7.8.-)
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:ACD22053.1}; EC=2.7.8.- {ECO:0000313|EMBL:ACD22053.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Undecaprenyl-phosphate glucose phosphotransferase n=2 Tax=Clostridium botulinum B RepID=B2TQI3_CLOBB
L1_008_000M1_scaffold_977_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8095..8814)
DNA (720bp) protein (240aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BF45_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:ERI70498.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
4Fe-4S binding domain.
L1_008_000M1_scaffold_977_8
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8920..9573
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RUK1_9FIRM
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KJF38803.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L1_008_000M1_scaffold_977_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9568..10872)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05592.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ATP-binding protein
L1_008_000M1_scaffold_977_10
unknown

Not on your lists

10955..11452
DNA (498bp) protein (166aa)

This feature has no annotations

L1_008_000M1_scaffold_977_11
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

11907..13745
DNA (1839bp) protein (613aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.4.12)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Z9Q1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD27212.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L1_008_000M1_scaffold_977_12
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13742..15208
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AJP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA51215.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
dolichyl-phosphate-mannose-mannosyltransferase family protein
L1_008_000M1_scaffold_977_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15198..16664
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AJP7_9CLOT
dolichyl-phosphate-mannose-mannosyltransferase family protein
Dolichyl-phosphate-mannose-mannosyltransferase family protein {ECO:0000313|EMBL:AIY82539.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L1_008_000M1_scaffold_977_14

Not on your lists

16661..18151
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZL92_9FIRM
Teichoic acid/polysaccharide glycosyl transferase {ECO:0000313|EMBL:AHF24132.1}; TaxID=1393580 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig46.;"
putative membrane protein
L1_008_000M1_scaffold_977_15
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18135..19232
DNA (1098bp) protein (366aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Malate/L-lactate dehydrogenase n=2 Tax=Lachnospiraceae RepID=C9L5C6_BLAHA
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:EEX22358.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
L1_008_000M1_scaffold_977_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19236..20555
DNA (1320bp) protein (440aa)
MATE efflux family protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X742_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ENY91708.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
MATE efflux family protein
L1_008_000M1_scaffold_977_17
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20789..21946
DNA (1158bp) protein (386aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
6-phosphofructokinase (EC:2.7.1.11)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M1M9_9FIRM
L1_008_000M1_scaffold_977_18
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22177..22986
DNA (810bp) protein (270aa)
ABC transporter, permease protein n=2 Tax=Roseburia RepID=C0FVE3_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG93444.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L1_008_000M1_scaffold_977_19
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22962..23768
DNA (807bp) protein (269aa)
ABC transporter, ATP-binding protein n=2 Tax=Roseburia RepID=C0FVE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30229.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L1_008_000M1_scaffold_977_20
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23925..24893
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N8H7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS76302.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L1_008_000M1_scaffold_977_21
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25193..26692
DNA (1500bp) protein (500aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N036_9FIRM
histidine kinase
L1_008_000M1_scaffold_977_22
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26697..27362
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M124_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64749.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
LuxR family transcriptional regulator
L1_008_000M1_scaffold_977_23
Shuttleworthia satelles, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27506..28327
DNA (822bp) protein (274aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=626523 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia satelles DSM 14600.;"
Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA58_9FIRM
6-phosphogluconolactonase/Glucosamine-6-phosphateisomerase/deaminase
L1_008_000M1_scaffold_977_24
Shuttleworthia sp. MSX8B, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28521..29669
DNA (1149bp) protein (383aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=936574 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia sp. MSX8B.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA57_9FIRM
L1_008_000M1_scaffold_977_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29868..31022
DNA (1155bp) protein (385aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Ketose-bisphosphate aldolase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPP9_9FIRM
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:EFB75245.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_008_000M1_scaffold_977_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31024..31869
DNA (846bp) protein (282aa)
Triose-phosphate isomerase {ECO:0000313|EMBL:EFB75246.1}; EC=5.3.1.1 {ECO:0000313|EMBL:EFB75246.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Triosephosphate isomerase (EC:5.3.1.1)
Triose-phosphate isomerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPQ0_9FIRM
L1_008_000M1_scaffold_977_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32071..32334
DNA (264bp) protein (88aa)
Uncharacterized protein (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM38528.1}; Flags: Fragment;; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Uncharacterized conserved protein (DUF2088).
Displaying 27 items

View Taxonomy