ggKbase home page

L1_008_000M1_scaffold_1309_27

Organism: dasL1_008_000M1_concoct_51_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 23762..24343

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor RpoE n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MNA0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 177.0
  • Bit_score: 152
  • Evalue 2.30e-34
Putative RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:CDB87252.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 177.0
  • Bit_score: 152
  • Evalue 3.20e-34
RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 181.0
  • Bit_score: 144
  • Evalue 1.70e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Firmicutes bacterium CAG:170 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 582
ATGGAGCGCGAAAACATTGCGCGGGCGGCTAAAGGCGATGCAAACGCCTTTGAAGCGCTGATGGGCGCATACGAAACAAAAATCTACGCGCTTTGCCTGCGGATGATGGGCAATCCCCACGACGGCGAGGACGCGGCGCAGGAAACGATGCTGCGCATTTGGCGCACGATCGGGCAATATCGGTTTGAGAGCGCGTTTTCCACGTGGATCTATCGGGTGACGGCTTCCTGCTGTATGGATGCGATTCGCAAGCGTCAGCGGCAAGCACAGCCGTCTTTGGAGGAAATGGGCGAGACGGACGGCTTTGATCCGGCGGACAGCGGCGAGACCCCACAGGAGCATGCCGAACGGACGGAGACGAGAAGCGCGATTCAGCGGGCGATTTCCGCCGTGCCGGAAACGATGCGCGAGGTCTTTCTGCTGCGGGATGTACACGGCCTCAGCGTGGAAGAGACGGCGCAGGCGCTGCAAATCGCGCAGGGAACGGTGAAATCGAGATTGGCGAGGGCGAGGGAGAAGATCGCCGCCGAGCTGAAACGGCGCGGCGTGGGAGAAACGGGAGGTGAACGACATGCGGTGTGA
PROTEIN sequence
Length: 194
MERENIARAAKGDANAFEALMGAYETKIYALCLRMMGNPHDGEDAAQETMLRIWRTIGQYRFESAFSTWIYRVTASCCMDAIRKRQRQAQPSLEEMGETDGFDPADSGETPQEHAERTETRSAIQRAISAVPETMREVFLLRDVHGLSVEETAQALQIAQGTVKSRLARAREKIAAELKRRGVGETGGERHAV*