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L1_008_000M1_scaffold_1309

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1309_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(274..1086)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70511.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
amino acid amidase
L1_008_000M1_scaffold_1309_2
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1101..1814)
DNA (714bp) protein (238aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I685_9FIRM
deoD; purine nucleoside phosphorylase
L1_008_000M1_scaffold_1309_3
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2131..2709
DNA (579bp) protein (193aa)
GtrA family protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YC89_9FIRM
GtrA family protein {ECO:0000313|EMBL:CDA18856.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
HAD-superfamily hydrolase
L1_008_000M1_scaffold_1309_4
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2725..3615
DNA (891bp) protein (297aa)
N-acetylneuraminate lyase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJ79_9FIRM
N-acetylneuraminate lyase {ECO:0000313|EMBL:EFV17080.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
dihydrodipicolinate synthetase
L1_008_000M1_scaffold_1309_5
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3686..5023)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI00036E0DC9
RNA methylase NOL1/NOP2/sun family protein {ECO:0000313|EMBL:CDE49857.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
RNA methyltransferase
L1_008_000M1_scaffold_1309_6
unknown

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comp(5061..5513)
DNA (453bp) protein (151aa)

This feature has no annotations

L1_008_000M1_scaffold_1309_7
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5648..6472)
DNA (825bp) protein (275aa)
Thioredoxin reductase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IGZ1_9FIRM
Thioredoxin reductase {ECO:0000313|EMBL:CDE49837.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
thioredoxin-disulfide reductase
L1_008_000M1_scaffold_1309_8
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6469..8739)
DNA (2271bp) protein (757aa)
glycosyl hydrolase (EC:2.4.1.8 3.2.1.-)
hypothetical protein n=1 Tax=Paenibacillus sp. A9 RepID=UPI000367B57C
Maltose phosphorylase {ECO:0000313|EMBL:EST12910.1}; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobacillus laevolacticus DSM 442.;"
L1_008_000M1_scaffold_1309_9
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8854..9309)
DNA (456bp) protein (152aa)
YhcH/YjgK/YiaL family protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DDQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGK89991.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
L1_008_000M1_scaffold_1309_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9398..9814)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IC54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49076.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L1_008_000M1_scaffold_1309_11
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9843..10880)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9ITS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25310.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L1_008_000M1_scaffold_1309_12

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11089..11904
DNA (816bp) protein (272aa)
Transglutaminase-like protein n=2 Tax=Clostridium RepID=U2BWV7_CLOSY
Transglutaminase family protein {ECO:0000313|EMBL:AHF25698.1}; TaxID=1393672 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_38.;"
Transglutaminase-like enzymes, putative cysteine proteases
L1_008_000M1_scaffold_1309_13

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11967..13016
DNA (1050bp) protein (350aa)
Bacterial type II secretion system domain protein F n=1 Tax=Clostridium sp. CAG:242 RepID=R6DJU6_9CLOT
Type II secretory pathway, component PulF {ECO:0000313|EMBL:AHF25699.1}; TaxID=1393672 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_38.;"
Type II secretory pathway, component PulF
L1_008_000M1_scaffold_1309_14

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13038..13364
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AHF25700.1}; TaxID=1393672 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_38.;"
hypothetical protein
L1_008_000M1_scaffold_1309_15

Not on your lists

13364..13837
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CZ09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AHF25701.1}; TaxID=1393672 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_38.;"
hypothetical protein
L1_008_000M1_scaffold_1309_16

Not on your lists

13842..14252
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:AHF25702.1}; TaxID=1393672 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_38.;"
L1_008_000M1_scaffold_1309_17

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14249..14725
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7UXL7_EEGSY
Uncharacterized protein {ECO:0000313|EMBL:AHF25703.1}; TaxID=1393672 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_38.;"
hypothetical protein
L1_008_000M1_scaffold_1309_18

Not on your lists

14727..15791
DNA (1065bp) protein (355aa)
Twitching motility protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EXQ8_CLOS4
Pilus retraction protein PilT {ECO:0000313|EMBL:AHF25704.1}; TaxID=1393672 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_38.;"
pilus retraction protein PilT
L1_008_000M1_scaffold_1309_19
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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15812..17092
DNA (1281bp) protein (427aa)
Bacterial transcriptional activator domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NR20_9FIRM
SARP family transcriptional regulator
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_1309_20
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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17099..17446
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BYD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD70914.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L1_008_000M1_scaffold_1309_21
unknown

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17522..17641
DNA (120bp) protein (40aa)

This feature has no annotations

L1_008_000M1_scaffold_1309_22
Treponema saccharophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(17768..18316)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI00034C2E60
Isochorismatase hydrolase {ECO:0000313|EMBL:EIC01045.1}; TaxID=907348 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema saccharophilum DSM 2985.;"
Amidases related to nicotinamidase
L1_008_000M1_scaffold_1309_23
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18540..19577
DNA (1038bp) protein (346aa)
Central glycolytic genes regulator n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9S6_9FIRM
Central glycolytic genes regulator {ECO:0000313|EMBL:CDE47252.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
transcriptional regulator with sigma factor-related N-terminal domain
L1_008_000M1_scaffold_1309_24
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19816..21021
DNA (1206bp) protein (402aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I721_9FIRM
L1_008_000M1_scaffold_1309_25
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21085..21834
DNA (750bp) protein (250aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
tpiA; Triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4W1_9FIRM
L1_008_000M1_scaffold_1309_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21845..23371
DNA (1527bp) protein (509aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNY6_9FIRM
L1_008_000M1_scaffold_1309_27
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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23762..24343
DNA (582bp) protein (194aa)
Putative RNA polymerase sigma factor RpoE n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MNA0_9FIRM
Putative RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:CDB87252.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
RNA polymerase ECF subfamily sigma factor
L1_008_000M1_scaffold_1309_28
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24333..25331
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CER3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67732.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L1_008_000M1_scaffold_1309_29
unknown

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25430..25882
DNA (453bp) protein (151aa)

This feature has no annotations

Displaying 29 items

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