ggKbase home page

L1_008_000M1_scaffold_2217_13

Organism: dasL1_008_000M1_concoct_51_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 13763..14914

Top 3 Functional Annotations

Value Algorithm Source
Autotransporter n=1 Tax=Pseudomonas syringae Cit 7 RepID=F3H5C7_PSESX similarity UNIREF
DB: UNIREF100
  • Identity: 26.5
  • Coverage: 423.0
  • Bit_score: 87
  • Evalue 3.00e-14
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:AKF53225.1}; TaxID=1324932 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. syringae HS191.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 26.7
  • Coverage: 419.0
  • Bit_score: 87
  • Evalue 2.50e-14
autotransporter similarity KEGG
DB: KEGG
  • Identity: 28.9
  • Coverage: 402.0
  • Bit_score: 82
  • Evalue 2.80e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas syringae → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGAAAGCAACGCAGGCTTGCGCCCTGTTCTTGCTGATTTTGCTGCTGTGCCCGCTTGCCGCGCAGGCGGGGACGCTCGGCCCGGCGCTCAGTTACAACGAATTGCTGGCTCTGGTGCGGCAGGCGCGCGATGGCGACGTGCTGCTTGTCTCCGGCGATTTGAGCGCAACCGACGAAGCGCTTGTCACCCCCGCCTTGCTGGAAATCACGGGCGACGGCAAAGCGACGCTGCGCCATCTGCACGTCAGCGATTCTTCCATTATCTTTTCAAATCTCTCCCTGCTCGATTCTTTCACGGTGGACGGCGTATCCAACATCGAGCTGCGCACGGTTCGCGTAGAAGGCGCGTCGGGGCAATACGGCCTGTCTTTCGTGGGCGGCGGCACATTGCTCATCGACGAAGACAGCAGCGTTGCCGGCGGCACGGGCGCAACCGGCGTCTCCATCAGCCAGCGCGGCGGCGATCTCTACGTCAGCATGGAGGGCAGTGTGCGCGGCGGCGCGGACGGCGGCAGCGGCATGGAAGTCTCGCCCATGACCGAATACGGTACCATGATGCTTGCCGGCAACATTTGCGGCGGCGACGGCACAACCATGGGCGGCACGGGGCTCAACCTGTTTGACCTGAGCGGCAACGCTTTTATCACCGTGGCGGGCAGCGTTCGCGGCGGCAAAGGTTCCGTCGGCGGCGCAGGCATGCAGGTGGTTTCCATCGGCGATACCGTTTCCATTGGCGTGAACGGCGAAATCCGCGGCGGCTCAGGCGCGGAATACGGCGGCGACGCACTCATCCTGATGGACGCGACGGCGGCTTCTTCTGTCAATCTGAGCGGCTCGCTGATTGGCGGCAACGCCTCCTCGCGCGGCGGCGAACCGGGGCAGTCGCTTCTGGTCGTCGGGGACAGCGTTTCCCATGCGCGGGTGGTCAACTGCCTGCTTCAGGACGGCGAAAATACGTTCTCCTATAACACGTTGATCACGCCCCTGCCGGAAATCACATCGTCCGTCGAGACGGTCGATCCTCTGCTCACGCCGACGCCTGAGTTCACGCCCGAACCGACGCCGGAACACACGCACGCTCCGCAGCCGACGCCGGAACCAAGCTTCACCCCCATTCCCGCAACGCCGGATGAAGCCAGTCCGGCAGAATAA
PROTEIN sequence
Length: 384
MKATQACALFLLILLLCPLAAQAGTLGPALSYNELLALVRQARDGDVLLVSGDLSATDEALVTPALLEITGDGKATLRHLHVSDSSIIFSNLSLLDSFTVDGVSNIELRTVRVEGASGQYGLSFVGGGTLLIDEDSSVAGGTGATGVSISQRGGDLYVSMEGSVRGGADGGSGMEVSPMTEYGTMMLAGNICGGDGTTMGGTGLNLFDLSGNAFITVAGSVRGGKGSVGGAGMQVVSIGDTVSIGVNGEIRGGSGAEYGGDALILMDATAASSVNLSGSLIGGNASSRGGEPGQSLLVVGDSVSHARVVNCLLQDGENTFSYNTLITPLPEITSSVETVDPLLTPTPEFTPEPTPEHTHAPQPTPEPSFTPIPATPDEASPAE*